Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AC022497.1-201ENST00000624916 3691 ntBASIC13.97□□□□□ -0.17
MMP13P45452 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MMP13P45452 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MMP13P45452 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
MMP13P45452 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
MMP13P45452 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MMP13P45452 TMED7-201ENST00000456936 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MMP13P45452 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
MMP13P45452 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
MMP13P45452 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
MMP13P45452 PTCD2-212ENST00000543322 2029 ntTSL 2 BASIC13.97□□□□□ -0.17
MMP13P45452 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
MMP13P45452 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
MMP13P45452 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
MMP13P45452 MOB3C-201ENST00000271139 2800 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
MMP13P45452 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
MMP13P45452 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MMP13P45452 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.96□□□□□ -0.17
MMP13P45452 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MMP13P45452 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MMP13P45452 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MMP13P45452 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC13.96□□□□□ -0.17
MMP13P45452 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
MMP13P45452 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
MMP13P45452 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MMP13P45452 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MMP13P45452 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.96□□□□□ -0.17
MMP13P45452 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
MMP13P45452 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
MMP13P45452 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
MMP13P45452 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC13.96□□□□□ -0.17
MMP13P45452 AC009549.1-201ENST00000603468 1686 ntBASIC13.96□□□□□ -0.17
MMP13P45452 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
MMP13P45452 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC13.96□□□□□ -0.17
MMP13P45452 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MMP13P45452 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MMP13P45452 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC13.96□□□□□ -0.17
MMP13P45452 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
MMP13P45452 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC13.96□□□□□ -0.17
MMP13P45452 PFN2-202ENST00000423691 911 ntTSL 2 BASIC13.96□□□□□ -0.17
MMP13P45452 AC078991.1-201ENST00000437297 610 ntBASIC13.96□□□□□ -0.17
MMP13P45452 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC13.96□□□□□ -0.17
MMP13P45452 AL354861.1-201ENST00000445213 355 ntBASIC13.96□□□□□ -0.17
MMP13P45452 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
MMP13P45452 LINC01428-201ENST00000449581 874 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
MMP13P45452 BUD31-205ENST00000456893 512 ntTSL 5 BASIC13.96□□□□□ -0.17
MMP13P45452 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC13.96□□□□□ -0.17
MMP13P45452 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MMP13P45452 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC13.96□□□□□ -0.17
MMP13P45452 AC068867.1-201ENST00000559855 150 ntBASIC13.96□□□□□ -0.17
MMP13P45452 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC13.96□□□□□ -0.17
MMP13P45452 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC13.96□□□□□ -0.17
MMP13P45452 RN7SL357P-201ENST00000581065 298 ntBASIC13.96□□□□□ -0.17
MMP13P45452 RN7SL470P-201ENST00000583069 259 ntBASIC13.96□□□□□ -0.17
MMP13P45452 AC132812.1-201ENST00000583145 892 ntBASIC13.96□□□□□ -0.17
MMP13P45452 RPL17P45-201ENST00000586289 509 ntBASIC13.96□□□□□ -0.17
MMP13P45452 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC13.96□□□□□ -0.17
MMP13P45452 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC13.96□□□□□ -0.17
MMP13P45452 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC13.96□□□□□ -0.17
MMP13P45452 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC13.96□□□□□ -0.17
MMP13P45452 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC13.96□□□□□ -0.17
MMP13P45452 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
MMP13P45452 YRDCP1-201ENST00000621419 643 ntBASIC13.96□□□□□ -0.17
MMP13P45452 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
MMP13P45452 RALGDS-203ENST00000372062 3596 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
MMP13P45452 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
MMP13P45452 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC13.96□□□□□ -0.17
MMP13P45452 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MMP13P45452 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
MMP13P45452 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
MMP13P45452 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
MMP13P45452 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
MMP13P45452 TRO-202ENST00000319167 2326 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
MMP13P45452 TRO-203ENST00000375022 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
MMP13P45452 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
MMP13P45452 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
MMP13P45452 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
MMP13P45452 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
MMP13P45452 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
MMP13P45452 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
MMP13P45452 AL354861.3-201ENST00000600140 2412 ntBASIC13.95□□□□□ -0.18
MMP13P45452 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
MMP13P45452 PYGO2-202ENST00000368457 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MMP13P45452 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
MMP13P45452 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
MMP13P45452 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
MMP13P45452 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MMP13P45452 AC006480.2-201ENST00000609770 1337 ntBASIC13.95□□□□□ -0.18
MMP13P45452 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC13.95□□□□□ -0.18
MMP13P45452 STRA6-201ENST00000323940 2864 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
MMP13P45452 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
MMP13P45452 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
MMP13P45452 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MMP13P45452 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MMP13P45452 SLC20A2-201ENST00000342228 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MMP13P45452 PLD5-204ENST00000442594 3305 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
MMP13P45452 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
MMP13P45452 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MMP13P45452 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC13.95□□□□□ -0.18
MMP13P45452 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms