Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC12.01□□□□□ -0.49
ZIC3O60481 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC12.01□□□□□ -0.49
ZIC3O60481 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ZIC3O60481 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
ZIC3O60481 RPS5-204ENST00000598098 536 ntTSL 2 BASIC12.01□□□□□ -0.49
ZIC3O60481 AC006548.2-201ENST00000605217 529 ntBASIC12.01□□□□□ -0.49
ZIC3O60481 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC12.01□□□□□ -0.49
ZIC3O60481 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC12.01□□□□□ -0.49
ZIC3O60481 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC12.01□□□□□ -0.49
ZIC3O60481 AL139823.1-201ENST00000641871 1225 ntBASIC12.01□□□□□ -0.49
ZIC3O60481 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
ZIC3O60481 HMGB1-202ENST00000339872 2319 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
ZIC3O60481 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC12.01□□□□□ -0.49
ZIC3O60481 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ZIC3O60481 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC12.01□□□□□ -0.49
ZIC3O60481 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
ZIC3O60481 AC104590.1-202ENST00000558368 1921 ntBASIC12.01□□□□□ -0.49
ZIC3O60481 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZIC3O60481 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZIC3O60481 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ZIC3O60481 KRT8P5-201ENST00000592443 1458 ntBASIC12.01□□□□□ -0.49
ZIC3O60481 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ZIC3O60481 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ZIC3O60481 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZIC3O60481 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZIC3O60481 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.01□□□□□ -0.49
ZIC3O60481 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZIC3O60481 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZIC3O60481 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZIC3O60481 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12□□□□□ -0.49
ZIC3O60481 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ZIC3O60481 ZNF772-203ENST00000425074 1601 ntTSL 2 BASIC12□□□□□ -0.49
ZIC3O60481 SOX30-203ENST00000519442 1666 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
ZIC3O60481 AC004899.2-201ENST00000622993 3860 ntBASIC12□□□□□ -0.49
ZIC3O60481 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC12□□□□□ -0.49
ZIC3O60481 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12□□□□□ -0.49
ZIC3O60481 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
ZIC3O60481 GHET1-201ENST00000627071 1906 ntBASIC12□□□□□ -0.49
ZIC3O60481 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
ZIC3O60481 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
ZIC3O60481 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12□□□□□ -0.49
ZIC3O60481 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
ZIC3O60481 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12□□□□□ -0.49
ZIC3O60481 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ZIC3O60481 RHCE-203ENST00000346452 971 ntTSL 1 (best) BASIC12□□□□□ -0.49
ZIC3O60481 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
ZIC3O60481 MRPL55-207ENST00000366733 834 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
ZIC3O60481 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC12□□□□□ -0.49
ZIC3O60481 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC12□□□□□ -0.49
ZIC3O60481 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC12□□□□□ -0.49
ZIC3O60481 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC12□□□□□ -0.49
ZIC3O60481 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC12□□□□□ -0.49
ZIC3O60481 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC12□□□□□ -0.49
ZIC3O60481 IFNWP2-201ENST00000431203 580 ntBASIC12□□□□□ -0.49
ZIC3O60481 HLA-DPA2-205ENST00000433582 733 ntBASIC12□□□□□ -0.49
ZIC3O60481 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC12□□□□□ -0.49
ZIC3O60481 CCND3P1-201ENST00000438347 580 ntBASIC12□□□□□ -0.49
ZIC3O60481 KRT18P66-201ENST00000452970 1269 ntBASIC12□□□□□ -0.49
ZIC3O60481 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC12□□□□□ -0.49
ZIC3O60481 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC12□□□□□ -0.49
ZIC3O60481 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ZIC3O60481 CASP3-205ENST00000517513 964 ntTSL 5 BASIC12□□□□□ -0.49
ZIC3O60481 PTK2-225ENST00000520892 571 ntTSL 4 BASIC12□□□□□ -0.49
ZIC3O60481 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC12□□□□□ -0.49
ZIC3O60481 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC12□□□□□ -0.49
ZIC3O60481 AC012146.4-201ENST00000575546 271 ntBASIC12□□□□□ -0.49
ZIC3O60481 AC127496.3-201ENST00000576032 494 ntTSL 3 BASIC12□□□□□ -0.49
ZIC3O60481 HKR1-225ENST00000592168 566 ntTSL 4 BASIC12□□□□□ -0.49
ZIC3O60481 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC12□□□□□ -0.49
ZIC3O60481 AC006262.2-202ENST00000600152 333 ntTSL 2 BASIC12□□□□□ -0.49
ZIC3O60481 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC12□□□□□ -0.49
ZIC3O60481 PEBP1P2-201ENST00000603980 558 ntBASIC12□□□□□ -0.49
ZIC3O60481 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC12□□□□□ -0.49
ZIC3O60481 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
ZIC3O60481 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12□□□□□ -0.49
ZIC3O60481 AC020931.1-201ENST00000589622 1346 ntBASIC12□□□□□ -0.49
ZIC3O60481 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ZIC3O60481 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ZIC3O60481 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC12□□□□□ -0.49
ZIC3O60481 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC12□□□□□ -0.49
ZIC3O60481 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12□□□□□ -0.49
ZIC3O60481 FPR2-203ENST00000598953 1544 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
ZIC3O60481 SUPT20HL1-201ENST00000436466 2618 ntBASIC12□□□□□ -0.49
ZIC3O60481 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC12□□□□□ -0.49
ZIC3O60481 DTX2P1-201ENST00000425797 1633 ntBASIC12□□□□□ -0.49
ZIC3O60481 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC12□□□□□ -0.49
ZIC3O60481 SERPING1-203ENST00000378323 1733 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
ZIC3O60481 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12□□□□□ -0.49
ZIC3O60481 PAK1-215ENST00000530617 3001 ntTSL 2 BASIC12□□□□□ -0.49
ZIC3O60481 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC12□□□□□ -0.49
ZIC3O60481 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12□□□□□ -0.49
ZIC3O60481 PECR-201ENST00000265322 1853 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ZIC3O60481 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ZIC3O60481 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
ZIC3O60481 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZIC3O60481 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC11.99□□□□□ -0.49
ZIC3O60481 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
ZIC3O60481 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
ZIC3O60481 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZIC3O60481 HDGF-203ENST00000368209 2171 ntTSL 2 BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms