Protein–RNA interactions for Protein: Q9Y678

COPG1, Coatomer subunit gamma-1, humanhuman

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1Q9Y678 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
COPG1Q9Y678 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COPG1Q9Y678 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.73■■□□□ 1.07
COPG1Q9Y678 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
COPG1Q9Y678 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COPG1Q9Y678 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.73■■□□□ 1.07
COPG1Q9Y678 AC092028.1-203ENST00000608262 953 ntBASIC21.73■■□□□ 1.07
COPG1Q9Y678 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.73■■□□□ 1.07
COPG1Q9Y678 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COPG1Q9Y678 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
COPG1Q9Y678 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
COPG1Q9Y678 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.73■■□□□ 1.07
COPG1Q9Y678 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COPG1Q9Y678 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COPG1Q9Y678 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COPG1Q9Y678 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.72■■□□□ 1.07
COPG1Q9Y678 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COPG1Q9Y678 ESRRAP2-201ENST00000418437 1549 ntBASIC21.72■■□□□ 1.07
COPG1Q9Y678 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
COPG1Q9Y678 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COPG1Q9Y678 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
COPG1Q9Y678 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
COPG1Q9Y678 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.72■■□□□ 1.07
COPG1Q9Y678 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COPG1Q9Y678 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COPG1Q9Y678 AC007375.3-201ENST00000600936 2314 ntBASIC21.71■■□□□ 1.07
COPG1Q9Y678 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COPG1Q9Y678 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COPG1Q9Y678 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COPG1Q9Y678 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
COPG1Q9Y678 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.71■■□□□ 1.07
COPG1Q9Y678 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.71■■□□□ 1.07
COPG1Q9Y678 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COPG1Q9Y678 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.71■■□□□ 1.07
COPG1Q9Y678 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
COPG1Q9Y678 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COPG1Q9Y678 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
COPG1Q9Y678 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
COPG1Q9Y678 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.7■■□□□ 1.06
COPG1Q9Y678 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
COPG1Q9Y678 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COPG1Q9Y678 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.7■■□□□ 1.06
COPG1Q9Y678 MIR638-201ENST00000385237 100 ntBASIC21.7■■□□□ 1.06
COPG1Q9Y678 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.7■■□□□ 1.06
COPG1Q9Y678 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.7■■□□□ 1.06
COPG1Q9Y678 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COPG1Q9Y678 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
COPG1Q9Y678 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COPG1Q9Y678 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.69■■□□□ 1.06
COPG1Q9Y678 AC079630.1-202ENST00000618127 1840 ntBASIC21.69■■□□□ 1.06
COPG1Q9Y678 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
COPG1Q9Y678 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
COPG1Q9Y678 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COPG1Q9Y678 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.69■■□□□ 1.06
COPG1Q9Y678 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.69■■□□□ 1.06
COPG1Q9Y678 AL139246.5-201ENST00000606645 996 ntBASIC21.69■■□□□ 1.06
COPG1Q9Y678 AC011551.1-201ENST00000614101 683 ntBASIC21.69■■□□□ 1.06
COPG1Q9Y678 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.69■■□□□ 1.06
COPG1Q9Y678 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
COPG1Q9Y678 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COPG1Q9Y678 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COPG1Q9Y678 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COPG1Q9Y678 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COPG1Q9Y678 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
COPG1Q9Y678 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.68■■□□□ 1.06
COPG1Q9Y678 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.68■■□□□ 1.06
COPG1Q9Y678 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.68■■□□□ 1.06
COPG1Q9Y678 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.68■■□□□ 1.06
COPG1Q9Y678 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.68■■□□□ 1.06
COPG1Q9Y678 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COPG1Q9Y678 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.68■■□□□ 1.06
COPG1Q9Y678 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.68■■□□□ 1.06
COPG1Q9Y678 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COPG1Q9Y678 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COPG1Q9Y678 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COPG1Q9Y678 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COPG1Q9Y678 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.68■■□□□ 1.06
COPG1Q9Y678 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COPG1Q9Y678 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.68■■□□□ 1.06
COPG1Q9Y678 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
COPG1Q9Y678 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COPG1Q9Y678 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COPG1Q9Y678 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COPG1Q9Y678 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COPG1Q9Y678 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.67■■□□□ 1.06
COPG1Q9Y678 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COPG1Q9Y678 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.67■■□□□ 1.06
COPG1Q9Y678 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COPG1Q9Y678 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COPG1Q9Y678 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.67■■□□□ 1.06
COPG1Q9Y678 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.67■■□□□ 1.06
COPG1Q9Y678 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
COPG1Q9Y678 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COPG1Q9Y678 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.66■■□□□ 1.06
COPG1Q9Y678 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COPG1Q9Y678 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COPG1Q9Y678 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.66■■□□□ 1.06
COPG1Q9Y678 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COPG1Q9Y678 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COPG1Q9Y678 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms