Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
KDM3AQ9Y4C1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC24.99■■□□□ 1.59
KDM3AQ9Y4C1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
KDM3AQ9Y4C1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
KDM3AQ9Y4C1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.99■■□□□ 1.59
KDM3AQ9Y4C1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
KDM3AQ9Y4C1 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
KDM3AQ9Y4C1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.98■■□□□ 1.59
KDM3AQ9Y4C1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
KDM3AQ9Y4C1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC24.98■■□□□ 1.59
KDM3AQ9Y4C1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC24.98■■□□□ 1.59
KDM3AQ9Y4C1 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC24.98■■□□□ 1.59
KDM3AQ9Y4C1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
KDM3AQ9Y4C1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
KDM3AQ9Y4C1 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
KDM3AQ9Y4C1 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC24.98■■□□□ 1.59
KDM3AQ9Y4C1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
KDM3AQ9Y4C1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
KDM3AQ9Y4C1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
KDM3AQ9Y4C1 AC026271.2-201ENST00000428091 497 ntBASIC24.97■■□□□ 1.59
KDM3AQ9Y4C1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC24.97■■□□□ 1.59
KDM3AQ9Y4C1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
KDM3AQ9Y4C1 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
KDM3AQ9Y4C1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC24.97■■□□□ 1.59
KDM3AQ9Y4C1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
KDM3AQ9Y4C1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
KDM3AQ9Y4C1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC24.96■■□□□ 1.59
KDM3AQ9Y4C1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.96■■□□□ 1.59
KDM3AQ9Y4C1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
KDM3AQ9Y4C1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC24.96■■□□□ 1.59
KDM3AQ9Y4C1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
KDM3AQ9Y4C1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC24.96■■□□□ 1.59
KDM3AQ9Y4C1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
KDM3AQ9Y4C1 AC009086.3-201ENST00000623486 1008 ntBASIC24.96■■□□□ 1.59
KDM3AQ9Y4C1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
KDM3AQ9Y4C1 RASA4CP-201ENST00000424092 1398 ntBASIC24.96■■□□□ 1.59
KDM3AQ9Y4C1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
KDM3AQ9Y4C1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
KDM3AQ9Y4C1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC24.95■■□□□ 1.59
KDM3AQ9Y4C1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC24.95■■□□□ 1.59
KDM3AQ9Y4C1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.95■■□□□ 1.58
KDM3AQ9Y4C1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC24.95■■□□□ 1.58
KDM3AQ9Y4C1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC24.95■■□□□ 1.58
KDM3AQ9Y4C1 AC136469.2-201ENST00000623944 1028 ntBASIC24.95■■□□□ 1.58
KDM3AQ9Y4C1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.95■■□□□ 1.58
KDM3AQ9Y4C1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
KDM3AQ9Y4C1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.95■■□□□ 1.58
KDM3AQ9Y4C1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
KDM3AQ9Y4C1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC24.95■■□□□ 1.58
KDM3AQ9Y4C1 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
KDM3AQ9Y4C1 HES6-206ENST00000409574 738 ntTSL 2 BASIC24.94■■□□□ 1.58
KDM3AQ9Y4C1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC24.94■■□□□ 1.58
KDM3AQ9Y4C1 AC027682.1-201ENST00000562846 899 ntBASIC24.94■■□□□ 1.58
KDM3AQ9Y4C1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
KDM3AQ9Y4C1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
KDM3AQ9Y4C1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
KDM3AQ9Y4C1 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
KDM3AQ9Y4C1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
KDM3AQ9Y4C1 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.93■■□□□ 1.58
KDM3AQ9Y4C1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
KDM3AQ9Y4C1 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
KDM3AQ9Y4C1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
KDM3AQ9Y4C1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
KDM3AQ9Y4C1 MAG-206ENST00000597035 542 ntTSL 4 BASIC24.93■■□□□ 1.58
KDM3AQ9Y4C1 CA15P2-201ENST00000611168 834 ntBASIC24.93■■□□□ 1.58
KDM3AQ9Y4C1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC24.93■■□□□ 1.58
KDM3AQ9Y4C1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC24.93■■□□□ 1.58
KDM3AQ9Y4C1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
KDM3AQ9Y4C1 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
KDM3AQ9Y4C1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC24.92■■□□□ 1.58
KDM3AQ9Y4C1 AC006455.2-201ENST00000429931 906 ntBASIC24.92■■□□□ 1.58
KDM3AQ9Y4C1 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
KDM3AQ9Y4C1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC24.92■■□□□ 1.58
KDM3AQ9Y4C1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC24.92■■□□□ 1.58
KDM3AQ9Y4C1 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
KDM3AQ9Y4C1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
KDM3AQ9Y4C1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
KDM3AQ9Y4C1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
KDM3AQ9Y4C1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC24.91■■□□□ 1.58
KDM3AQ9Y4C1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC24.91■■□□□ 1.58
KDM3AQ9Y4C1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
KDM3AQ9Y4C1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
KDM3AQ9Y4C1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC24.91■■□□□ 1.58
KDM3AQ9Y4C1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
KDM3AQ9Y4C1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
KDM3AQ9Y4C1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
KDM3AQ9Y4C1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
KDM3AQ9Y4C1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC24.9■■□□□ 1.58
KDM3AQ9Y4C1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
KDM3AQ9Y4C1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC24.9■■□□□ 1.58
KDM3AQ9Y4C1 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
KDM3AQ9Y4C1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC24.9■■□□□ 1.58
KDM3AQ9Y4C1 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
KDM3AQ9Y4C1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC24.89■■□□□ 1.58
KDM3AQ9Y4C1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC24.89■■□□□ 1.58
KDM3AQ9Y4C1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
KDM3AQ9Y4C1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC24.89■■□□□ 1.58
KDM3AQ9Y4C1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
KDM3AQ9Y4C1 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
KDM3AQ9Y4C1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC24.88■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms