Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHB16Q9NRJ7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB16Q9NRJ7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB16Q9NRJ7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB16Q9NRJ7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHB16Q9NRJ7 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PCDHB16Q9NRJ7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHB16Q9NRJ7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.1■□□□□ 0.65
PCDHB16Q9NRJ7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHB16Q9NRJ7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHB16Q9NRJ7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB16Q9NRJ7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB16Q9NRJ7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB16Q9NRJ7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PCDHB16Q9NRJ7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHB16Q9NRJ7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB16Q9NRJ7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB16Q9NRJ7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PCDHB16Q9NRJ7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB16Q9NRJ7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB16Q9NRJ7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHB16Q9NRJ7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB16Q9NRJ7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB16Q9NRJ7 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB16Q9NRJ7 AC010980.1-201ENST00000587192 1142 ntBASIC19.09■□□□□ 0.65
PCDHB16Q9NRJ7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PCDHB16Q9NRJ7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB16Q9NRJ7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB16Q9NRJ7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHB16Q9NRJ7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PCDHB16Q9NRJ7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB16Q9NRJ7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHB16Q9NRJ7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
PCDHB16Q9NRJ7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHB16Q9NRJ7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHB16Q9NRJ7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
PCDHB16Q9NRJ7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHB16Q9NRJ7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB16Q9NRJ7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB16Q9NRJ7 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHB16Q9NRJ7 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
PCDHB16Q9NRJ7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHB16Q9NRJ7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.08■□□□□ 0.64
PCDHB16Q9NRJ7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB16Q9NRJ7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHB16Q9NRJ7 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB16Q9NRJ7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHB16Q9NRJ7 AC079630.1-202ENST00000618127 1840 ntBASIC19.07■□□□□ 0.64
PCDHB16Q9NRJ7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB16Q9NRJ7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB16Q9NRJ7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
PCDHB16Q9NRJ7 PVT1_1.1-201ENST00000615125 194 ntBASIC19.07■□□□□ 0.64
PCDHB16Q9NRJ7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB16Q9NRJ7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB16Q9NRJ7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB16Q9NRJ7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB16Q9NRJ7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHB16Q9NRJ7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB16Q9NRJ7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PCDHB16Q9NRJ7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB16Q9NRJ7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB16Q9NRJ7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB16Q9NRJ7 YBX1P4-201ENST00000392794 808 ntBASIC19.06■□□□□ 0.64
PCDHB16Q9NRJ7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PCDHB16Q9NRJ7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
PCDHB16Q9NRJ7 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHB16Q9NRJ7 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHB16Q9NRJ7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB16Q9NRJ7 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PCDHB16Q9NRJ7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB16Q9NRJ7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB16Q9NRJ7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB16Q9NRJ7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PCDHB16Q9NRJ7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB16Q9NRJ7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHB16Q9NRJ7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB16Q9NRJ7 EP400NL-214ENST00000641289 2402 ntBASIC19.05■□□□□ 0.64
PCDHB16Q9NRJ7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHB16Q9NRJ7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHB16Q9NRJ7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHB16Q9NRJ7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB16Q9NRJ7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PCDHB16Q9NRJ7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB16Q9NRJ7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB16Q9NRJ7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB16Q9NRJ7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHB16Q9NRJ7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB16Q9NRJ7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB16Q9NRJ7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDHB16Q9NRJ7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDHB16Q9NRJ7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PCDHB16Q9NRJ7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB16Q9NRJ7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
PCDHB16Q9NRJ7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB16Q9NRJ7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB16Q9NRJ7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB16Q9NRJ7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB16Q9NRJ7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB16Q9NRJ7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHB16Q9NRJ7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms