Protein–RNA interactions for Protein: Q9HBH1

PDF, Peptide deformylase, mitochondrial, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDFQ9HBH1 AC133561.4-201ENST00000566112 224 ntBASIC22.54■■□□□ 1.2
PDFQ9HBH1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
PDFQ9HBH1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.54■■□□□ 1.2
PDFQ9HBH1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.54■■□□□ 1.2
PDFQ9HBH1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDFQ9HBH1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.53■■□□□ 1.2
PDFQ9HBH1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDFQ9HBH1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDFQ9HBH1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDFQ9HBH1 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.53■■□□□ 1.2
PDFQ9HBH1 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDFQ9HBH1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PDFQ9HBH1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.53■■□□□ 1.2
PDFQ9HBH1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
PDFQ9HBH1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.53■■□□□ 1.2
PDFQ9HBH1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.53■■□□□ 1.2
PDFQ9HBH1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.53■■□□□ 1.2
PDFQ9HBH1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDFQ9HBH1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
PDFQ9HBH1 MIR638-201ENST00000385237 100 ntBASIC22.52■■□□□ 1.2
PDFQ9HBH1 OR2I1P-207ENST00000453522 948 ntBASIC22.52■■□□□ 1.2
PDFQ9HBH1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.52■■□□□ 1.2
PDFQ9HBH1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDFQ9HBH1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
PDFQ9HBH1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.52■■□□□ 1.2
PDFQ9HBH1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDFQ9HBH1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.52■■□□□ 1.2
PDFQ9HBH1 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
PDFQ9HBH1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDFQ9HBH1 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.51■■□□□ 1.19
PDFQ9HBH1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.51■■□□□ 1.19
PDFQ9HBH1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
PDFQ9HBH1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PDFQ9HBH1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDFQ9HBH1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
PDFQ9HBH1 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
PDFQ9HBH1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PDFQ9HBH1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
PDFQ9HBH1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.5■■□□□ 1.19
PDFQ9HBH1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.5■■□□□ 1.19
PDFQ9HBH1 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
PDFQ9HBH1 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.5■■□□□ 1.19
PDFQ9HBH1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
PDFQ9HBH1 EDA-201ENST00000338901 1233 ntBASIC22.5■■□□□ 1.19
PDFQ9HBH1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PDFQ9HBH1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.5■■□□□ 1.19
PDFQ9HBH1 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.5■■□□□ 1.19
PDFQ9HBH1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.5■■□□□ 1.19
PDFQ9HBH1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PDFQ9HBH1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
PDFQ9HBH1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PDFQ9HBH1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.49■■□□□ 1.19
PDFQ9HBH1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.49■■□□□ 1.19
PDFQ9HBH1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.49■■□□□ 1.19
PDFQ9HBH1 SLC47A1P1-202ENST00000449666 945 ntBASIC22.49■■□□□ 1.19
PDFQ9HBH1 AC010525.1-201ENST00000585559 441 ntBASIC22.49■■□□□ 1.19
PDFQ9HBH1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.49■■□□□ 1.19
PDFQ9HBH1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.49■■□□□ 1.19
PDFQ9HBH1 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PDFQ9HBH1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.49■■□□□ 1.19
PDFQ9HBH1 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PDFQ9HBH1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PDFQ9HBH1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.49■■□□□ 1.19
PDFQ9HBH1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PDFQ9HBH1 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PDFQ9HBH1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.48■■□□□ 1.19
PDFQ9HBH1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.48■■□□□ 1.19
PDFQ9HBH1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
PDFQ9HBH1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
PDFQ9HBH1 AP001330.3-201ENST00000520123 633 ntBASIC22.48■■□□□ 1.19
PDFQ9HBH1 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.48■■□□□ 1.19
PDFQ9HBH1 C9orf163-202ENST00000624034 2573 ntBASIC22.48■■□□□ 1.19
PDFQ9HBH1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PDFQ9HBH1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
PDFQ9HBH1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.48■■□□□ 1.19
PDFQ9HBH1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.47■■□□□ 1.19
PDFQ9HBH1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PDFQ9HBH1 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
PDFQ9HBH1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.47■■□□□ 1.19
PDFQ9HBH1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.47■■□□□ 1.19
PDFQ9HBH1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PDFQ9HBH1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PDFQ9HBH1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PDFQ9HBH1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
PDFQ9HBH1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PDFQ9HBH1 SUDS3P1-201ENST00000505831 966 ntBASIC22.47■■□□□ 1.19
PDFQ9HBH1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
PDFQ9HBH1 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
PDFQ9HBH1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PDFQ9HBH1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PDFQ9HBH1 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.46■■□□□ 1.19
PDFQ9HBH1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PDFQ9HBH1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PDFQ9HBH1 BX842568.3-201ENST00000418104 571 ntBASIC22.46■■□□□ 1.19
PDFQ9HBH1 AL355001.2-201ENST00000620617 1191 ntBASIC22.46■■□□□ 1.19
PDFQ9HBH1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.46■■□□□ 1.19
PDFQ9HBH1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PDFQ9HBH1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PDFQ9HBH1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.46■■□□□ 1.19
PDFQ9HBH1 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms