Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SP110Q9HB58 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SP110Q9HB58 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
SP110Q9HB58 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SP110Q9HB58 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
SP110Q9HB58 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
SP110Q9HB58 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SP110Q9HB58 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.65■■□□□ 1.22
SP110Q9HB58 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.65■■□□□ 1.22
SP110Q9HB58 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SP110Q9HB58 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
SP110Q9HB58 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.65■■□□□ 1.22
SP110Q9HB58 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.65■■□□□ 1.22
SP110Q9HB58 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.64■■□□□ 1.22
SP110Q9HB58 AC133637.1-201ENST00000624115 1537 ntBASIC22.64■■□□□ 1.21
SP110Q9HB58 UNC93B3-201ENST00000308076 687 ntBASIC22.64■■□□□ 1.21
SP110Q9HB58 AC096631.2-201ENST00000436136 790 ntBASIC22.64■■□□□ 1.21
SP110Q9HB58 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.21
SP110Q9HB58 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC22.64■■□□□ 1.21
SP110Q9HB58 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
SP110Q9HB58 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
SP110Q9HB58 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
SP110Q9HB58 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SP110Q9HB58 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.63■■□□□ 1.21
SP110Q9HB58 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
SP110Q9HB58 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.63■■□□□ 1.21
SP110Q9HB58 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
SP110Q9HB58 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SP110Q9HB58 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SP110Q9HB58 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
SP110Q9HB58 AL138724.1-201ENST00000606771 1088 ntBASIC22.63■■□□□ 1.21
SP110Q9HB58 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
SP110Q9HB58 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.63■■□□□ 1.21
SP110Q9HB58 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SP110Q9HB58 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.63■■□□□ 1.21
SP110Q9HB58 AC004687.1-201ENST00000579003 1625 ntBASIC22.63■■□□□ 1.21
SP110Q9HB58 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SP110Q9HB58 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.63■■□□□ 1.21
SP110Q9HB58 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SP110Q9HB58 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.63■■□□□ 1.21
SP110Q9HB58 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SP110Q9HB58 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SP110Q9HB58 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SP110Q9HB58 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
SP110Q9HB58 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
SP110Q9HB58 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.62■■□□□ 1.21
SP110Q9HB58 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SP110Q9HB58 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.62■■□□□ 1.21
SP110Q9HB58 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.62■■□□□ 1.21
SP110Q9HB58 C9orf163-202ENST00000624034 2573 ntBASIC22.62■■□□□ 1.21
SP110Q9HB58 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SP110Q9HB58 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
SP110Q9HB58 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
SP110Q9HB58 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SP110Q9HB58 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
SP110Q9HB58 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SP110Q9HB58 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.61■■□□□ 1.21
SP110Q9HB58 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.61■■□□□ 1.21
SP110Q9HB58 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.61■■□□□ 1.21
SP110Q9HB58 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.61■■□□□ 1.21
SP110Q9HB58 AL136162.1-201ENST00000607711 1078 ntBASIC22.61■■□□□ 1.21
SP110Q9HB58 AC011298.3-201ENST00000615796 283 ntBASIC22.61■■□□□ 1.21
SP110Q9HB58 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SP110Q9HB58 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.61■■□□□ 1.21
SP110Q9HB58 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.61■■□□□ 1.21
SP110Q9HB58 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SP110Q9HB58 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.6■■□□□ 1.21
SP110Q9HB58 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
SP110Q9HB58 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.6■■□□□ 1.21
SP110Q9HB58 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
SP110Q9HB58 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.6■■□□□ 1.21
SP110Q9HB58 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SP110Q9HB58 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.6■■□□□ 1.21
SP110Q9HB58 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SP110Q9HB58 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SP110Q9HB58 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SP110Q9HB58 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.6■■□□□ 1.21
SP110Q9HB58 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SP110Q9HB58 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SP110Q9HB58 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SP110Q9HB58 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SP110Q9HB58 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
SP110Q9HB58 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
SP110Q9HB58 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.59■■□□□ 1.21
SP110Q9HB58 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SP110Q9HB58 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SP110Q9HB58 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SP110Q9HB58 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.59■■□□□ 1.21
SP110Q9HB58 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
SP110Q9HB58 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SP110Q9HB58 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SP110Q9HB58 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
SP110Q9HB58 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SP110Q9HB58 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
SP110Q9HB58 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SP110Q9HB58 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SP110Q9HB58 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
SP110Q9HB58 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.58■■□□□ 1.21
SP110Q9HB58 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.58■■□□□ 1.21
SP110Q9HB58 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms