Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
POLR1BQ9H9Y6 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
POLR1BQ9H9Y6 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
POLR1BQ9H9Y6 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
POLR1BQ9H9Y6 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.73■■□□□ 1.07
POLR1BQ9H9Y6 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.73■■□□□ 1.07
POLR1BQ9H9Y6 AC090192.1-201ENST00000517740 490 ntBASIC21.73■■□□□ 1.07
POLR1BQ9H9Y6 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.73■■□□□ 1.07
POLR1BQ9H9Y6 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
POLR1BQ9H9Y6 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
POLR1BQ9H9Y6 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
POLR1BQ9H9Y6 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
POLR1BQ9H9Y6 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
POLR1BQ9H9Y6 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
POLR1BQ9H9Y6 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
POLR1BQ9H9Y6 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
POLR1BQ9H9Y6 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.72■■□□□ 1.07
POLR1BQ9H9Y6 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
POLR1BQ9H9Y6 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
POLR1BQ9H9Y6 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
POLR1BQ9H9Y6 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
POLR1BQ9H9Y6 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.72■■□□□ 1.07
POLR1BQ9H9Y6 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
POLR1BQ9H9Y6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
POLR1BQ9H9Y6 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
POLR1BQ9H9Y6 AC009086.3-201ENST00000623486 1008 ntBASIC21.72■■□□□ 1.07
POLR1BQ9H9Y6 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
POLR1BQ9H9Y6 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.71■■□□□ 1.07
POLR1BQ9H9Y6 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
POLR1BQ9H9Y6 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
POLR1BQ9H9Y6 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
POLR1BQ9H9Y6 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
POLR1BQ9H9Y6 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.71■■□□□ 1.07
POLR1BQ9H9Y6 AC006455.2-201ENST00000429931 906 ntBASIC21.71■■□□□ 1.07
POLR1BQ9H9Y6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.71■■□□□ 1.07
POLR1BQ9H9Y6 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.71■■□□□ 1.07
POLR1BQ9H9Y6 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.71■■□□□ 1.07
POLR1BQ9H9Y6 MIR3181-201ENST00000578512 73 ntBASIC21.71■■□□□ 1.07
POLR1BQ9H9Y6 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.71■■□□□ 1.07
POLR1BQ9H9Y6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.71■■□□□ 1.07
POLR1BQ9H9Y6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.71■■□□□ 1.07
POLR1BQ9H9Y6 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
POLR1BQ9H9Y6 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.71■■□□□ 1.07
POLR1BQ9H9Y6 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
POLR1BQ9H9Y6 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
POLR1BQ9H9Y6 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.07
POLR1BQ9H9Y6 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.7■■□□□ 1.07
POLR1BQ9H9Y6 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
POLR1BQ9H9Y6 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
POLR1BQ9H9Y6 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
POLR1BQ9H9Y6 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.7■■□□□ 1.06
POLR1BQ9H9Y6 AC022517.1-201ENST00000592429 346 ntBASIC21.7■■□□□ 1.06
POLR1BQ9H9Y6 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
POLR1BQ9H9Y6 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
POLR1BQ9H9Y6 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.7■■□□□ 1.06
POLR1BQ9H9Y6 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
POLR1BQ9H9Y6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
POLR1BQ9H9Y6 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
POLR1BQ9H9Y6 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
POLR1BQ9H9Y6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
POLR1BQ9H9Y6 AC141586.4-201ENST00000624558 1573 ntBASIC21.7■■□□□ 1.06
POLR1BQ9H9Y6 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
POLR1BQ9H9Y6 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
POLR1BQ9H9Y6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.69■■□□□ 1.06
POLR1BQ9H9Y6 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
POLR1BQ9H9Y6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
POLR1BQ9H9Y6 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
POLR1BQ9H9Y6 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
POLR1BQ9H9Y6 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
POLR1BQ9H9Y6 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.69■■□□□ 1.06
POLR1BQ9H9Y6 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
POLR1BQ9H9Y6 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
POLR1BQ9H9Y6 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
POLR1BQ9H9Y6 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
POLR1BQ9H9Y6 SLC6A10P-202ENST00000431994 2058 ntBASIC21.68■■□□□ 1.06
POLR1BQ9H9Y6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
POLR1BQ9H9Y6 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.68■■□□□ 1.06
POLR1BQ9H9Y6 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.68■■□□□ 1.06
POLR1BQ9H9Y6 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
POLR1BQ9H9Y6 AL137784.2-201ENST00000607332 1000 ntBASIC21.68■■□□□ 1.06
POLR1BQ9H9Y6 AL117328.2-201ENST00000624617 1940 ntBASIC21.68■■□□□ 1.06
POLR1BQ9H9Y6 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.68■■□□□ 1.06
POLR1BQ9H9Y6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
POLR1BQ9H9Y6 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
POLR1BQ9H9Y6 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
POLR1BQ9H9Y6 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
POLR1BQ9H9Y6 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
POLR1BQ9H9Y6 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
POLR1BQ9H9Y6 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
POLR1BQ9H9Y6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.67■■□□□ 1.06
POLR1BQ9H9Y6 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.67■■□□□ 1.06
POLR1BQ9H9Y6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
POLR1BQ9H9Y6 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
POLR1BQ9H9Y6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
POLR1BQ9H9Y6 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.67■■□□□ 1.06
POLR1BQ9H9Y6 YBX1P1-201ENST00000445822 960 ntBASIC21.67■■□□□ 1.06
POLR1BQ9H9Y6 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.67■■□□□ 1.06
POLR1BQ9H9Y6 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.67■■□□□ 1.06
POLR1BQ9H9Y6 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.67■■□□□ 1.06
POLR1BQ9H9Y6 AC126544.1-201ENST00000580842 1059 ntBASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms