Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
RPAP1Q9BWH6 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC26.99■■□□□ 1.91
RPAP1Q9BWH6 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RPAP1Q9BWH6 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
RPAP1Q9BWH6 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC26.99■■□□□ 1.91
RPAP1Q9BWH6 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
RPAP1Q9BWH6 NKILA-201ENST00000613231 537 ntTSL 4 BASIC26.98■■□□□ 1.91
RPAP1Q9BWH6 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
RPAP1Q9BWH6 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
RPAP1Q9BWH6 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC26.97■■□□□ 1.91
RPAP1Q9BWH6 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC26.97■■□□□ 1.91
RPAP1Q9BWH6 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC26.97■■□□□ 1.91
RPAP1Q9BWH6 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC26.97■■□□□ 1.91
RPAP1Q9BWH6 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC26.97■■□□□ 1.91
RPAP1Q9BWH6 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RPAP1Q9BWH6 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
RPAP1Q9BWH6 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
RPAP1Q9BWH6 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
RPAP1Q9BWH6 JTB-203ENST00000368589 1216 ntTSL 2 BASIC26.97■■□□□ 1.91
RPAP1Q9BWH6 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC26.97■■□□□ 1.91
RPAP1Q9BWH6 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
RPAP1Q9BWH6 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC26.96■■□□□ 1.91
RPAP1Q9BWH6 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
RPAP1Q9BWH6 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
RPAP1Q9BWH6 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
RPAP1Q9BWH6 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
RPAP1Q9BWH6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
RPAP1Q9BWH6 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
RPAP1Q9BWH6 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC26.96■■□□□ 1.91
RPAP1Q9BWH6 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
RPAP1Q9BWH6 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC26.96■■□□□ 1.91
RPAP1Q9BWH6 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
RPAP1Q9BWH6 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
RPAP1Q9BWH6 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC26.96■■□□□ 1.91
RPAP1Q9BWH6 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
RPAP1Q9BWH6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
RPAP1Q9BWH6 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC26.95■■□□□ 1.9
RPAP1Q9BWH6 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
RPAP1Q9BWH6 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
RPAP1Q9BWH6 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
RPAP1Q9BWH6 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
RPAP1Q9BWH6 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
RPAP1Q9BWH6 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RPAP1Q9BWH6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC26.93■■□□□ 1.9
RPAP1Q9BWH6 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RPAP1Q9BWH6 DUSP8P3-201ENST00000399571 1760 ntBASIC26.93■■□□□ 1.9
RPAP1Q9BWH6 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RPAP1Q9BWH6 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
RPAP1Q9BWH6 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC26.93■■□□□ 1.9
RPAP1Q9BWH6 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RPAP1Q9BWH6 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RPAP1Q9BWH6 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RPAP1Q9BWH6 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
RPAP1Q9BWH6 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RPAP1Q9BWH6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
RPAP1Q9BWH6 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
RPAP1Q9BWH6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
RPAP1Q9BWH6 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.92■■□□□ 1.9
RPAP1Q9BWH6 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RPAP1Q9BWH6 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC26.91■■□□□ 1.9
RPAP1Q9BWH6 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC26.91■■□□□ 1.9
RPAP1Q9BWH6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
RPAP1Q9BWH6 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RPAP1Q9BWH6 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RPAP1Q9BWH6 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RPAP1Q9BWH6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC26.91■■□□□ 1.9
RPAP1Q9BWH6 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC26.91■■□□□ 1.9
RPAP1Q9BWH6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC26.91■■□□□ 1.9
RPAP1Q9BWH6 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
RPAP1Q9BWH6 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RPAP1Q9BWH6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
RPAP1Q9BWH6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC26.91■■□□□ 1.9
RPAP1Q9BWH6 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
RPAP1Q9BWH6 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC26.9■■□□□ 1.9
RPAP1Q9BWH6 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
RPAP1Q9BWH6 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC26.9■■□□□ 1.9
RPAP1Q9BWH6 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
RPAP1Q9BWH6 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC26.9■■□□□ 1.9
RPAP1Q9BWH6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC26.9■■□□□ 1.9
RPAP1Q9BWH6 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RPAP1Q9BWH6 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RPAP1Q9BWH6 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC26.9■■□□□ 1.9
RPAP1Q9BWH6 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
RPAP1Q9BWH6 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC26.9■■□□□ 1.9
RPAP1Q9BWH6 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RPAP1Q9BWH6 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RPAP1Q9BWH6 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RPAP1Q9BWH6 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
RPAP1Q9BWH6 AK1-201ENST00000223836 736 ntTSL 3 BASIC26.89■■□□□ 1.9
RPAP1Q9BWH6 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
RPAP1Q9BWH6 GRAMD4P2-201ENST00000423297 1097 ntBASIC26.89■■□□□ 1.9
RPAP1Q9BWH6 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
RPAP1Q9BWH6 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC26.89■■□□□ 1.9
RPAP1Q9BWH6 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
RPAP1Q9BWH6 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC26.89■■□□□ 1.89
RPAP1Q9BWH6 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC26.88■■□□□ 1.89
RPAP1Q9BWH6 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
RPAP1Q9BWH6 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
RPAP1Q9BWH6 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC26.88■■□□□ 1.89
RPAP1Q9BWH6 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC26.88■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms