Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HMCN1Q96RW7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HMCN1Q96RW7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
HMCN1Q96RW7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC6.95□□□□□ -1.3
HMCN1Q96RW7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC6.95□□□□□ -1.3
HMCN1Q96RW7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HMCN1Q96RW7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HMCN1Q96RW7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
HMCN1Q96RW7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HMCN1Q96RW7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC6.95□□□□□ -1.3
HMCN1Q96RW7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC6.94□□□□□ -1.3
HMCN1Q96RW7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC6.94□□□□□ -1.3
HMCN1Q96RW7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC6.94□□□□□ -1.3
HMCN1Q96RW7 AC133552.2-202ENST00000575694 574 ntBASIC6.94□□□□□ -1.3
HMCN1Q96RW7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC6.94□□□□□ -1.3
HMCN1Q96RW7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HMCN1Q96RW7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
HMCN1Q96RW7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMCN1Q96RW7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC6.94□□□□□ -1.3
HMCN1Q96RW7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HMCN1Q96RW7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC6.94□□□□□ -1.3
HMCN1Q96RW7 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC6.94□□□□□ -1.3
HMCN1Q96RW7 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMCN1Q96RW7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HMCN1Q96RW7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC6.94□□□□□ -1.3
HMCN1Q96RW7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC6.94□□□□□ -1.3
HMCN1Q96RW7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
HMCN1Q96RW7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMCN1Q96RW7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC6.94□□□□□ -1.3
HMCN1Q96RW7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
HMCN1Q96RW7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC6.94□□□□□ -1.3
HMCN1Q96RW7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMCN1Q96RW7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
HMCN1Q96RW7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HMCN1Q96RW7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMCN1Q96RW7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
HMCN1Q96RW7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC6.94□□□□□ -1.3
HMCN1Q96RW7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
HMCN1Q96RW7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC6.94□□□□□ -1.3
HMCN1Q96RW7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC6.93□□□□□ -1.3
HMCN1Q96RW7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HMCN1Q96RW7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC6.93□□□□□ -1.3
HMCN1Q96RW7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HMCN1Q96RW7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HMCN1Q96RW7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC6.93□□□□□ -1.3
HMCN1Q96RW7 CD177P1-201ENST00000606252 935 ntBASIC6.93□□□□□ -1.3
HMCN1Q96RW7 AL590326.2-201ENST00000625139 305 ntBASIC6.93□□□□□ -1.3
HMCN1Q96RW7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC6.93□□□□□ -1.3
HMCN1Q96RW7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HMCN1Q96RW7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
HMCN1Q96RW7 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC6.93□□□□□ -1.3
HMCN1Q96RW7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC6.93□□□□□ -1.3
HMCN1Q96RW7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
HMCN1Q96RW7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC6.93□□□□□ -1.3
HMCN1Q96RW7 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC6.93□□□□□ -1.3
HMCN1Q96RW7 AC092865.7-201ENST00000641832 219 ntBASIC6.93□□□□□ -1.3
HMCN1Q96RW7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
HMCN1Q96RW7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC6.93□□□□□ -1.3
HMCN1Q96RW7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HMCN1Q96RW7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HMCN1Q96RW7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
HMCN1Q96RW7 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC6.93□□□□□ -1.3
HMCN1Q96RW7 MIR4758-201ENST00000577688 71 ntBASIC6.93□□□□□ -1.3
HMCN1Q96RW7 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HMCN1Q96RW7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC6.92□□□□□ -1.3
HMCN1Q96RW7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC6.92□□□□□ -1.3
HMCN1Q96RW7 REXO1L12P-201ENST00000622156 912 ntBASIC6.92□□□□□ -1.3
HMCN1Q96RW7 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC6.92□□□□□ -1.3
HMCN1Q96RW7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HMCN1Q96RW7 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HMCN1Q96RW7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HMCN1Q96RW7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HMCN1Q96RW7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HMCN1Q96RW7 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC6.92□□□□□ -1.3
HMCN1Q96RW7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC6.92□□□□□ -1.3
HMCN1Q96RW7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC6.92□□□□□ -1.3
HMCN1Q96RW7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC6.92□□□□□ -1.3
HMCN1Q96RW7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC6.92□□□□□ -1.3
HMCN1Q96RW7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC6.92□□□□□ -1.3
HMCN1Q96RW7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HMCN1Q96RW7 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HMCN1Q96RW7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
HMCN1Q96RW7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HMCN1Q96RW7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HMCN1Q96RW7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HMCN1Q96RW7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC6.92□□□□□ -1.3
HMCN1Q96RW7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HMCN1Q96RW7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HMCN1Q96RW7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HMCN1Q96RW7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HMCN1Q96RW7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HMCN1Q96RW7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HMCN1Q96RW7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC6.92□□□□□ -1.3
HMCN1Q96RW7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC6.92□□□□□ -1.3
HMCN1Q96RW7 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
HMCN1Q96RW7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
HMCN1Q96RW7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC6.92□□□□□ -1.3
HMCN1Q96RW7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HMCN1Q96RW7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
HMCN1Q96RW7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms