Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CNTNAP3BQ96NU0 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNTNAP3BQ96NU0 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CNTNAP3BQ96NU0 DUX4L16-201ENST00000555130 1264 ntBASIC21.25■□□□□ 0.99
CNTNAP3BQ96NU0 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.25■□□□□ 0.99
CNTNAP3BQ96NU0 AC073912.3-201ENST00000624414 853 ntBASIC21.25■□□□□ 0.99
CNTNAP3BQ96NU0 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CNTNAP3BQ96NU0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CNTNAP3BQ96NU0 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CNTNAP3BQ96NU0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CNTNAP3BQ96NU0 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.24■□□□□ 0.99
CNTNAP3BQ96NU0 AC211429.1-201ENST00000415277 523 ntBASIC21.24■□□□□ 0.99
CNTNAP3BQ96NU0 AC007322.1-201ENST00000426983 750 ntBASIC21.24■□□□□ 0.99
CNTNAP3BQ96NU0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNTNAP3BQ96NU0 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNTNAP3BQ96NU0 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNTNAP3BQ96NU0 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNTNAP3BQ96NU0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNTNAP3BQ96NU0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.23■□□□□ 0.99
CNTNAP3BQ96NU0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNTNAP3BQ96NU0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CNTNAP3BQ96NU0 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.23■□□□□ 0.99
CNTNAP3BQ96NU0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.23■□□□□ 0.99
CNTNAP3BQ96NU0 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CNTNAP3BQ96NU0 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CNTNAP3BQ96NU0 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CNTNAP3BQ96NU0 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNTNAP3BQ96NU0 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNTNAP3BQ96NU0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.23■□□□□ 0.99
CNTNAP3BQ96NU0 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.23■□□□□ 0.99
CNTNAP3BQ96NU0 UNC93B4-201ENST00000505679 747 ntBASIC21.23■□□□□ 0.99
CNTNAP3BQ96NU0 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CNTNAP3BQ96NU0 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CNTNAP3BQ96NU0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.23■□□□□ 0.99
CNTNAP3BQ96NU0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CNTNAP3BQ96NU0 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CNTNAP3BQ96NU0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.23■□□□□ 0.99
CNTNAP3BQ96NU0 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.22■□□□□ 0.99
CNTNAP3BQ96NU0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNTNAP3BQ96NU0 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNTNAP3BQ96NU0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNTNAP3BQ96NU0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.22■□□□□ 0.99
CNTNAP3BQ96NU0 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNTNAP3BQ96NU0 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNTNAP3BQ96NU0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.22■□□□□ 0.99
CNTNAP3BQ96NU0 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.22■□□□□ 0.99
CNTNAP3BQ96NU0 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CNTNAP3BQ96NU0 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.22■□□□□ 0.99
CNTNAP3BQ96NU0 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.22■□□□□ 0.99
CNTNAP3BQ96NU0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNTNAP3BQ96NU0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CNTNAP3BQ96NU0 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNTNAP3BQ96NU0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.21■□□□□ 0.99
CNTNAP3BQ96NU0 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CNTNAP3BQ96NU0 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CNTNAP3BQ96NU0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.21■□□□□ 0.99
CNTNAP3BQ96NU0 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.21■□□□□ 0.99
CNTNAP3BQ96NU0 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNTNAP3BQ96NU0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNTNAP3BQ96NU0 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNTNAP3BQ96NU0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNTNAP3BQ96NU0 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CNTNAP3BQ96NU0 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.2■□□□□ 0.98
CNTNAP3BQ96NU0 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
CNTNAP3BQ96NU0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CNTNAP3BQ96NU0 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.2■□□□□ 0.98
CNTNAP3BQ96NU0 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.2■□□□□ 0.98
CNTNAP3BQ96NU0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNTNAP3BQ96NU0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.2■□□□□ 0.98
CNTNAP3BQ96NU0 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNTNAP3BQ96NU0 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNTNAP3BQ96NU0 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.19■□□□□ 0.98
CNTNAP3BQ96NU0 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.19■□□□□ 0.98
CNTNAP3BQ96NU0 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CNTNAP3BQ96NU0 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.19■□□□□ 0.98
CNTNAP3BQ96NU0 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CNTNAP3BQ96NU0 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.19■□□□□ 0.98
CNTNAP3BQ96NU0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.19■□□□□ 0.98
CNTNAP3BQ96NU0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.19■□□□□ 0.98
CNTNAP3BQ96NU0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.19■□□□□ 0.98
CNTNAP3BQ96NU0 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CNTNAP3BQ96NU0 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNTNAP3BQ96NU0 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CNTNAP3BQ96NU0 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CNTNAP3BQ96NU0 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNTNAP3BQ96NU0 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.18■□□□□ 0.98
CNTNAP3BQ96NU0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.18■□□□□ 0.98
CNTNAP3BQ96NU0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.18■□□□□ 0.98
CNTNAP3BQ96NU0 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CNTNAP3BQ96NU0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
CNTNAP3BQ96NU0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
CNTNAP3BQ96NU0 RARRES2P4-201ENST00000514074 484 ntBASIC21.18■□□□□ 0.98
CNTNAP3BQ96NU0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
CNTNAP3BQ96NU0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CNTNAP3BQ96NU0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNTNAP3BQ96NU0 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNTNAP3BQ96NU0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNTNAP3BQ96NU0 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.18■□□□□ 0.98
CNTNAP3BQ96NU0 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNTNAP3BQ96NU0 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms