Protein–RNA interactions for Protein: Q96M98

PACRG, Parkin coregulated gene protein, humanhuman

Predicted RBP Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGQ96M98 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PACRGQ96M98 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PACRGQ96M98 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
PACRGQ96M98 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PACRGQ96M98 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PACRGQ96M98 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.77■□□□□ 0.28
PACRGQ96M98 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PACRGQ96M98 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
PACRGQ96M98 AC139530.1-201ENST00000575312 1977 ntBASIC16.77■□□□□ 0.28
PACRGQ96M98 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PACRGQ96M98 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PACRGQ96M98 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PACRGQ96M98 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PACRGQ96M98 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PACRGQ96M98 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PACRGQ96M98 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PACRGQ96M98 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.77■□□□□ 0.27
PACRGQ96M98 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.77■□□□□ 0.27
PACRGQ96M98 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PACRGQ96M98 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PACRGQ96M98 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.76■□□□□ 0.27
PACRGQ96M98 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.76■□□□□ 0.27
PACRGQ96M98 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PACRGQ96M98 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.76■□□□□ 0.27
PACRGQ96M98 AC087289.5-201ENST00000586076 3175 ntBASIC16.76■□□□□ 0.27
PACRGQ96M98 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
PACRGQ96M98 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PACRGQ96M98 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PACRGQ96M98 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC16.76■□□□□ 0.27
PACRGQ96M98 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC16.76■□□□□ 0.27
PACRGQ96M98 AC108673.1-201ENST00000510422 1159 ntBASIC16.76■□□□□ 0.27
PACRGQ96M98 CHML-205ENST00000638160 705 ntTSL 3 BASIC16.76■□□□□ 0.27
PACRGQ96M98 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PACRGQ96M98 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
PACRGQ96M98 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PACRGQ96M98 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PACRGQ96M98 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PACRGQ96M98 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PACRGQ96M98 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PACRGQ96M98 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PACRGQ96M98 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.75■□□□□ 0.27
PACRGQ96M98 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PACRGQ96M98 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.75■□□□□ 0.27
PACRGQ96M98 LINC00273-201ENST00000539813 1452 ntBASIC16.75■□□□□ 0.27
PACRGQ96M98 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PACRGQ96M98 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PACRGQ96M98 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PACRGQ96M98 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.75■□□□□ 0.27
PACRGQ96M98 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PACRGQ96M98 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PACRGQ96M98 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PACRGQ96M98 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PACRGQ96M98 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PACRGQ96M98 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PACRGQ96M98 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PACRGQ96M98 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
PACRGQ96M98 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.74■□□□□ 0.27
PACRGQ96M98 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
PACRGQ96M98 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PACRGQ96M98 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
PACRGQ96M98 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PACRGQ96M98 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PACRGQ96M98 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PACRGQ96M98 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
PACRGQ96M98 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PACRGQ96M98 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC16.74■□□□□ 0.27
PACRGQ96M98 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC16.74■□□□□ 0.27
PACRGQ96M98 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PACRGQ96M98 FAM99A-202ENST00000538190 1989 ntBASIC16.74■□□□□ 0.27
PACRGQ96M98 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
PACRGQ96M98 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PACRGQ96M98 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.74■□□□□ 0.27
PACRGQ96M98 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PACRGQ96M98 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
PACRGQ96M98 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PACRGQ96M98 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PACRGQ96M98 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PACRGQ96M98 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PACRGQ96M98 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
PACRGQ96M98 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.73■□□□□ 0.27
PACRGQ96M98 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PACRGQ96M98 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PACRGQ96M98 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.73■□□□□ 0.27
PACRGQ96M98 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
PACRGQ96M98 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PACRGQ96M98 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PACRGQ96M98 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PACRGQ96M98 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.73■□□□□ 0.27
PACRGQ96M98 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC16.73■□□□□ 0.27
PACRGQ96M98 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PACRGQ96M98 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC16.73■□□□□ 0.27
PACRGQ96M98 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC16.73■□□□□ 0.27
PACRGQ96M98 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PACRGQ96M98 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PACRGQ96M98 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PACRGQ96M98 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC16.73■□□□□ 0.27
PACRGQ96M98 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PACRGQ96M98 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PACRGQ96M98 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PACRGQ96M98 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms