Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 GCSHP5-201ENST00000443090 522 ntBASIC19.6■□□□□ 0.73
USP9XQ93008 RPS2P52-201ENST00000469610 820 ntBASIC19.6■□□□□ 0.73
USP9XQ93008 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.6■□□□□ 0.73
USP9XQ93008 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.6■□□□□ 0.73
USP9XQ93008 AF201337.1-201ENST00000520239 748 ntBASIC19.6■□□□□ 0.73
USP9XQ93008 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
USP9XQ93008 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP9XQ93008 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC19.59■□□□□ 0.73
USP9XQ93008 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP9XQ93008 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.59■□□□□ 0.73
USP9XQ93008 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.59■□□□□ 0.73
USP9XQ93008 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.59■□□□□ 0.73
USP9XQ93008 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.59■□□□□ 0.73
USP9XQ93008 AC007322.1-201ENST00000426983 750 ntBASIC19.59■□□□□ 0.73
USP9XQ93008 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
USP9XQ93008 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP9XQ93008 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP9XQ93008 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP9XQ93008 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
USP9XQ93008 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
USP9XQ93008 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
USP9XQ93008 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.58■□□□□ 0.73
USP9XQ93008 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
USP9XQ93008 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.58■□□□□ 0.73
USP9XQ93008 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
USP9XQ93008 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
USP9XQ93008 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
USP9XQ93008 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
USP9XQ93008 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
USP9XQ93008 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP9XQ93008 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP9XQ93008 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
USP9XQ93008 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP9XQ93008 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.57■□□□□ 0.72
USP9XQ93008 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP9XQ93008 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP9XQ93008 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP9XQ93008 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
USP9XQ93008 CNN2P6-201ENST00000439038 900 ntBASIC19.56■□□□□ 0.72
USP9XQ93008 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
USP9XQ93008 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
USP9XQ93008 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.56■□□□□ 0.72
USP9XQ93008 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP9XQ93008 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP9XQ93008 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP9XQ93008 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.56■□□□□ 0.72
USP9XQ93008 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.56■□□□□ 0.72
USP9XQ93008 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
USP9XQ93008 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
USP9XQ93008 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.56■□□□□ 0.72
USP9XQ93008 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP9XQ93008 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
USP9XQ93008 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
USP9XQ93008 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP9XQ93008 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP9XQ93008 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.55■□□□□ 0.72
USP9XQ93008 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.55■□□□□ 0.72
USP9XQ93008 AL121832.2-201ENST00000610979 668 ntBASIC19.55■□□□□ 0.72
USP9XQ93008 MIR6089-201ENST00000616698 64 ntBASIC19.55■□□□□ 0.72
USP9XQ93008 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USP9XQ93008 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USP9XQ93008 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP9XQ93008 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP9XQ93008 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
USP9XQ93008 KRT18P29-201ENST00000397031 1267 ntBASIC19.55■□□□□ 0.72
USP9XQ93008 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.55■□□□□ 0.72
USP9XQ93008 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP9XQ93008 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP9XQ93008 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.54■□□□□ 0.72
USP9XQ93008 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.54■□□□□ 0.72
USP9XQ93008 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.54■□□□□ 0.72
USP9XQ93008 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.54■□□□□ 0.72
USP9XQ93008 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP9XQ93008 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.54■□□□□ 0.72
USP9XQ93008 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.54■□□□□ 0.72
USP9XQ93008 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP9XQ93008 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.54■□□□□ 0.72
USP9XQ93008 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP9XQ93008 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.53■□□□□ 0.72
USP9XQ93008 UBE2DNL-204ENST00000602536 740 ntBASIC19.53■□□□□ 0.72
USP9XQ93008 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP9XQ93008 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.53■□□□□ 0.72
USP9XQ93008 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP9XQ93008 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.53■□□□□ 0.72
USP9XQ93008 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
USP9XQ93008 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.53■□□□□ 0.72
USP9XQ93008 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.53■□□□□ 0.72
USP9XQ93008 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP9XQ93008 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP9XQ93008 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP9XQ93008 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP9XQ93008 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP9XQ93008 SMUG1P1-201ENST00000590640 811 ntBASIC19.52■□□□□ 0.72
USP9XQ93008 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.52■□□□□ 0.72
USP9XQ93008 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP9XQ93008 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
USP9XQ93008 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP9XQ93008 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP9XQ93008 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.51■□□□□ 0.71
USP9XQ93008 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms