Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
RNF139Q8WU17 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RNF139Q8WU17 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.24■■□□□ 1.31
RNF139Q8WU17 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RNF139Q8WU17 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.24■■□□□ 1.31
RNF139Q8WU17 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RNF139Q8WU17 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.24■■□□□ 1.31
RNF139Q8WU17 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
RNF139Q8WU17 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RNF139Q8WU17 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
RNF139Q8WU17 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
RNF139Q8WU17 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
RNF139Q8WU17 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.23■■□□□ 1.31
RNF139Q8WU17 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
RNF139Q8WU17 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RNF139Q8WU17 DUSP8P3-201ENST00000399571 1760 ntBASIC23.23■■□□□ 1.31
RNF139Q8WU17 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.23■■□□□ 1.31
RNF139Q8WU17 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RNF139Q8WU17 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RNF139Q8WU17 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RNF139Q8WU17 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.23■■□□□ 1.31
RNF139Q8WU17 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.23■■□□□ 1.31
RNF139Q8WU17 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.23■■□□□ 1.31
RNF139Q8WU17 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.23■■□□□ 1.31
RNF139Q8WU17 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
RNF139Q8WU17 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RNF139Q8WU17 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
RNF139Q8WU17 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RNF139Q8WU17 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.22■■□□□ 1.31
RNF139Q8WU17 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RNF139Q8WU17 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
RNF139Q8WU17 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
RNF139Q8WU17 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.22■■□□□ 1.31
RNF139Q8WU17 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RNF139Q8WU17 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RNF139Q8WU17 AC142381.2-201ENST00000566120 298 ntBASIC23.22■■□□□ 1.31
RNF139Q8WU17 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.22■■□□□ 1.31
RNF139Q8WU17 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RNF139Q8WU17 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
RNF139Q8WU17 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RNF139Q8WU17 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
RNF139Q8WU17 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
RNF139Q8WU17 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.22■■□□□ 1.31
RNF139Q8WU17 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RNF139Q8WU17 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RNF139Q8WU17 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
RNF139Q8WU17 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
RNF139Q8WU17 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RNF139Q8WU17 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.21■■□□□ 1.31
RNF139Q8WU17 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.21■■□□□ 1.31
RNF139Q8WU17 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.21■■□□□ 1.31
RNF139Q8WU17 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.21■■□□□ 1.31
RNF139Q8WU17 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
RNF139Q8WU17 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RNF139Q8WU17 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RNF139Q8WU17 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
RNF139Q8WU17 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RNF139Q8WU17 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RNF139Q8WU17 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
RNF139Q8WU17 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.2■■□□□ 1.3
RNF139Q8WU17 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RNF139Q8WU17 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
RNF139Q8WU17 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RNF139Q8WU17 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.2■■□□□ 1.3
RNF139Q8WU17 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RNF139Q8WU17 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.2■■□□□ 1.3
RNF139Q8WU17 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.2■■□□□ 1.3
RNF139Q8WU17 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF139Q8WU17 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RNF139Q8WU17 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.19■■□□□ 1.3
RNF139Q8WU17 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF139Q8WU17 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF139Q8WU17 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.19■■□□□ 1.3
RNF139Q8WU17 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF139Q8WU17 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF139Q8WU17 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF139Q8WU17 AC019069.1-201ENST00000610008 1333 ntBASIC23.19■■□□□ 1.3
RNF139Q8WU17 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.19■■□□□ 1.3
RNF139Q8WU17 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.19■■□□□ 1.3
RNF139Q8WU17 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.19■■□□□ 1.3
RNF139Q8WU17 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.19■■□□□ 1.3
RNF139Q8WU17 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.19■■□□□ 1.3
RNF139Q8WU17 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF139Q8WU17 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RNF139Q8WU17 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF139Q8WU17 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.18■■□□□ 1.3
RNF139Q8WU17 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RNF139Q8WU17 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.18■■□□□ 1.3
RNF139Q8WU17 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.18■■□□□ 1.3
RNF139Q8WU17 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.18■■□□□ 1.3
RNF139Q8WU17 AL031432.3-201ENST00000607698 485 ntBASIC23.18■■□□□ 1.3
RNF139Q8WU17 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RNF139Q8WU17 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RNF139Q8WU17 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF139Q8WU17 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF139Q8WU17 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.17■■□□□ 1.3
RNF139Q8WU17 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RNF139Q8WU17 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RNF139Q8WU17 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
RNF139Q8WU17 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms