Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SH3RF2Q8TEC5 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
SH3RF2Q8TEC5 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
SH3RF2Q8TEC5 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
SH3RF2Q8TEC5 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
SH3RF2Q8TEC5 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
SH3RF2Q8TEC5 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.05■■□□□ 1.28
SH3RF2Q8TEC5 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
SH3RF2Q8TEC5 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SH3RF2Q8TEC5 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.04■■□□□ 1.28
SH3RF2Q8TEC5 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
SH3RF2Q8TEC5 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SH3RF2Q8TEC5 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SH3RF2Q8TEC5 MIR572-201ENST00000384983 95 ntBASIC23.04■■□□□ 1.28
SH3RF2Q8TEC5 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.04■■□□□ 1.28
SH3RF2Q8TEC5 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SH3RF2Q8TEC5 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.04■■□□□ 1.28
SH3RF2Q8TEC5 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SH3RF2Q8TEC5 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.04■■□□□ 1.28
SH3RF2Q8TEC5 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.03■■□□□ 1.28
SH3RF2Q8TEC5 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SH3RF2Q8TEC5 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SH3RF2Q8TEC5 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SH3RF2Q8TEC5 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.03■■□□□ 1.28
SH3RF2Q8TEC5 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SH3RF2Q8TEC5 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.03■■□□□ 1.28
SH3RF2Q8TEC5 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SH3RF2Q8TEC5 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SH3RF2Q8TEC5 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.02■■□□□ 1.28
SH3RF2Q8TEC5 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.02■■□□□ 1.28
SH3RF2Q8TEC5 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC23.02■■□□□ 1.28
SH3RF2Q8TEC5 YBX1P1-201ENST00000445822 960 ntBASIC23.02■■□□□ 1.28
SH3RF2Q8TEC5 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC23.02■■□□□ 1.28
SH3RF2Q8TEC5 AL358852.1-201ENST00000623174 1268 ntBASIC23.02■■□□□ 1.28
SH3RF2Q8TEC5 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SH3RF2Q8TEC5 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SH3RF2Q8TEC5 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SH3RF2Q8TEC5 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.02■■□□□ 1.28
SH3RF2Q8TEC5 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SH3RF2Q8TEC5 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SH3RF2Q8TEC5 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SH3RF2Q8TEC5 AC079630.1-202ENST00000618127 1840 ntBASIC23.01■■□□□ 1.27
SH3RF2Q8TEC5 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.01■■□□□ 1.27
SH3RF2Q8TEC5 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SH3RF2Q8TEC5 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.01■■□□□ 1.27
SH3RF2Q8TEC5 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
SH3RF2Q8TEC5 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.01■■□□□ 1.27
SH3RF2Q8TEC5 ABCB10P4-201ENST00000566803 2184 ntBASIC23■■□□□ 1.27
SH3RF2Q8TEC5 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SH3RF2Q8TEC5 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
SH3RF2Q8TEC5 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SH3RF2Q8TEC5 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23■■□□□ 1.27
SH3RF2Q8TEC5 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC23■■□□□ 1.27
SH3RF2Q8TEC5 MIR6084-201ENST00000622012 110 ntBASIC23■■□□□ 1.27
SH3RF2Q8TEC5 AL031602.1-201ENST00000633169 911 ntBASIC23■■□□□ 1.27
SH3RF2Q8TEC5 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23■■□□□ 1.27
SH3RF2Q8TEC5 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
SH3RF2Q8TEC5 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23■■□□□ 1.27
SH3RF2Q8TEC5 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23■■□□□ 1.27
SH3RF2Q8TEC5 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SH3RF2Q8TEC5 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SH3RF2Q8TEC5 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.99■■□□□ 1.27
SH3RF2Q8TEC5 AC012414.1-201ENST00000556676 535 ntBASIC22.99■■□□□ 1.27
SH3RF2Q8TEC5 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SH3RF2Q8TEC5 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
SH3RF2Q8TEC5 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.98■■□□□ 1.27
SH3RF2Q8TEC5 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SH3RF2Q8TEC5 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.98■■□□□ 1.27
SH3RF2Q8TEC5 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SH3RF2Q8TEC5 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.98■■□□□ 1.27
SH3RF2Q8TEC5 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SH3RF2Q8TEC5 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
SH3RF2Q8TEC5 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
SH3RF2Q8TEC5 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SH3RF2Q8TEC5 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.98■■□□□ 1.27
SH3RF2Q8TEC5 AP005435.1-201ENST00000529293 1178 ntBASIC22.98■■□□□ 1.27
SH3RF2Q8TEC5 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SH3RF2Q8TEC5 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.98■■□□□ 1.27
SH3RF2Q8TEC5 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SH3RF2Q8TEC5 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.98■■□□□ 1.27
SH3RF2Q8TEC5 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SH3RF2Q8TEC5 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.97■■□□□ 1.27
SH3RF2Q8TEC5 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.97■■□□□ 1.27
SH3RF2Q8TEC5 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SH3RF2Q8TEC5 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.97■■□□□ 1.27
SH3RF2Q8TEC5 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SH3RF2Q8TEC5 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
SH3RF2Q8TEC5 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SH3RF2Q8TEC5 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.97■■□□□ 1.27
SH3RF2Q8TEC5 AC027612.3-201ENST00000413684 1047 ntBASIC22.97■■□□□ 1.27
SH3RF2Q8TEC5 GLI3-203ENST00000437480 451 ntTSL 2 BASIC22.97■■□□□ 1.27
SH3RF2Q8TEC5 AC034268.1-201ENST00000441047 882 ntBASIC22.97■■□□□ 1.27
SH3RF2Q8TEC5 AL354811.1-201ENST00000610286 706 ntBASIC22.97■■□□□ 1.27
SH3RF2Q8TEC5 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SH3RF2Q8TEC5 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SH3RF2Q8TEC5 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SH3RF2Q8TEC5 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.96■■□□□ 1.27
SH3RF2Q8TEC5 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.96■■□□□ 1.27
SH3RF2Q8TEC5 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.96■■□□□ 1.27
SH3RF2Q8TEC5 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms