Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PCDH19Q8TAB3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC22.9■■□□□ 1.26
PCDH19Q8TAB3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDH19Q8TAB3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDH19Q8TAB3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDH19Q8TAB3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.89■■□□□ 1.26
PCDH19Q8TAB3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PCDH19Q8TAB3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.26
PCDH19Q8TAB3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
PCDH19Q8TAB3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDH19Q8TAB3 AL117328.2-201ENST00000624617 1940 ntBASIC22.89■■□□□ 1.25
PCDH19Q8TAB3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDH19Q8TAB3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.89■■□□□ 1.25
PCDH19Q8TAB3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PCDH19Q8TAB3 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.89■■□□□ 1.25
PCDH19Q8TAB3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.89■■□□□ 1.25
PCDH19Q8TAB3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDH19Q8TAB3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PCDH19Q8TAB3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.88■■□□□ 1.25
PCDH19Q8TAB3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDH19Q8TAB3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.88■■□□□ 1.25
PCDH19Q8TAB3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDH19Q8TAB3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDH19Q8TAB3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.88■■□□□ 1.25
PCDH19Q8TAB3 AC131281.2-201ENST00000520478 145 ntBASIC22.88■■□□□ 1.25
PCDH19Q8TAB3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.88■■□□□ 1.25
PCDH19Q8TAB3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.88■■□□□ 1.25
PCDH19Q8TAB3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.88■■□□□ 1.25
PCDH19Q8TAB3 AC009086.3-201ENST00000623486 1008 ntBASIC22.88■■□□□ 1.25
PCDH19Q8TAB3 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDH19Q8TAB3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.88■■□□□ 1.25
PCDH19Q8TAB3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDH19Q8TAB3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PCDH19Q8TAB3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.88■■□□□ 1.25
PCDH19Q8TAB3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.88■■□□□ 1.25
PCDH19Q8TAB3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PCDH19Q8TAB3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
PCDH19Q8TAB3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDH19Q8TAB3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDH19Q8TAB3 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDH19Q8TAB3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PCDH19Q8TAB3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.87■■□□□ 1.25
PCDH19Q8TAB3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.87■■□□□ 1.25
PCDH19Q8TAB3 AL512631.2-201ENST00000604634 923 ntBASIC22.87■■□□□ 1.25
PCDH19Q8TAB3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.87■■□□□ 1.25
PCDH19Q8TAB3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDH19Q8TAB3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDH19Q8TAB3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDH19Q8TAB3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.86■■□□□ 1.25
PCDH19Q8TAB3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PCDH19Q8TAB3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDH19Q8TAB3 ESRRAP2-201ENST00000418437 1549 ntBASIC22.86■■□□□ 1.25
PCDH19Q8TAB3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.86■■□□□ 1.25
PCDH19Q8TAB3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.85■■□□□ 1.25
PCDH19Q8TAB3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDH19Q8TAB3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDH19Q8TAB3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.85■■□□□ 1.25
PCDH19Q8TAB3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDH19Q8TAB3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDH19Q8TAB3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
PCDH19Q8TAB3 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDH19Q8TAB3 GUSBP5-202ENST00000510805 1989 ntBASIC22.85■■□□□ 1.25
PCDH19Q8TAB3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.85■■□□□ 1.25
PCDH19Q8TAB3 AC087742.1-201ENST00000575880 1738 ntBASIC22.85■■□□□ 1.25
PCDH19Q8TAB3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDH19Q8TAB3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDH19Q8TAB3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDH19Q8TAB3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PCDH19Q8TAB3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDH19Q8TAB3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDH19Q8TAB3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
PCDH19Q8TAB3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PCDH19Q8TAB3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.84■■□□□ 1.25
PCDH19Q8TAB3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.84■■□□□ 1.25
PCDH19Q8TAB3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.84■■□□□ 1.25
PCDH19Q8TAB3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDH19Q8TAB3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.84■■□□□ 1.25
PCDH19Q8TAB3 AL499627.2-201ENST00000606283 725 ntBASIC22.84■■□□□ 1.25
PCDH19Q8TAB3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDH19Q8TAB3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDH19Q8TAB3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDH19Q8TAB3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDH19Q8TAB3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.83■■□□□ 1.25
PCDH19Q8TAB3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDH19Q8TAB3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.83■■□□□ 1.25
PCDH19Q8TAB3 AC004687.1-201ENST00000579003 1625 ntBASIC22.83■■□□□ 1.25
PCDH19Q8TAB3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PCDH19Q8TAB3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PCDH19Q8TAB3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.83■■□□□ 1.25
PCDH19Q8TAB3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PCDH19Q8TAB3 AC006455.2-201ENST00000429931 906 ntBASIC22.83■■□□□ 1.25
PCDH19Q8TAB3 AC241377.3-202ENST00000626088 1088 ntBASIC22.83■■□□□ 1.25
PCDH19Q8TAB3 AC241585.3-202ENST00000628937 1088 ntBASIC22.83■■□□□ 1.25
PCDH19Q8TAB3 AC245100.8-202ENST00000629247 1058 ntBASIC22.83■■□□□ 1.25
PCDH19Q8TAB3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
PCDH19Q8TAB3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.83■■□□□ 1.25
PCDH19Q8TAB3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.24
PCDH19Q8TAB3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.24
PCDH19Q8TAB3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.24
PCDH19Q8TAB3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms