Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
BBS1Q8NFJ9 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.9■□□□□ 0.78
BBS1Q8NFJ9 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
BBS1Q8NFJ9 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
BBS1Q8NFJ9 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BBS1Q8NFJ9 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.9■□□□□ 0.78
BBS1Q8NFJ9 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
BBS1Q8NFJ9 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BBS1Q8NFJ9 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.9■□□□□ 0.78
BBS1Q8NFJ9 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.9■□□□□ 0.78
BBS1Q8NFJ9 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
BBS1Q8NFJ9 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.78
BBS1Q8NFJ9 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BBS1Q8NFJ9 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
BBS1Q8NFJ9 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
BBS1Q8NFJ9 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
BBS1Q8NFJ9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.89■□□□□ 0.77
BBS1Q8NFJ9 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.89■□□□□ 0.77
BBS1Q8NFJ9 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.89■□□□□ 0.77
BBS1Q8NFJ9 AC144652.1-201ENST00000609974 1624 ntBASIC19.89■□□□□ 0.77
BBS1Q8NFJ9 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
BBS1Q8NFJ9 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
BBS1Q8NFJ9 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
BBS1Q8NFJ9 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BBS1Q8NFJ9 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.88■□□□□ 0.77
BBS1Q8NFJ9 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BBS1Q8NFJ9 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.88■□□□□ 0.77
BBS1Q8NFJ9 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.88■□□□□ 0.77
BBS1Q8NFJ9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
BBS1Q8NFJ9 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BBS1Q8NFJ9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.88■□□□□ 0.77
BBS1Q8NFJ9 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.88■□□□□ 0.77
BBS1Q8NFJ9 SNX5-217ENST00000606557 1087 ntBASIC19.88■□□□□ 0.77
BBS1Q8NFJ9 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
BBS1Q8NFJ9 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
BBS1Q8NFJ9 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
BBS1Q8NFJ9 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BBS1Q8NFJ9 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
BBS1Q8NFJ9 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
BBS1Q8NFJ9 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.87■□□□□ 0.77
BBS1Q8NFJ9 TSPY13P-201ENST00000338964 914 ntBASIC19.87■□□□□ 0.77
BBS1Q8NFJ9 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.87■□□□□ 0.77
BBS1Q8NFJ9 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BBS1Q8NFJ9 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
BBS1Q8NFJ9 FBXW4P1-201ENST00000426721 2239 ntBASIC19.87■□□□□ 0.77
BBS1Q8NFJ9 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
BBS1Q8NFJ9 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BBS1Q8NFJ9 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BBS1Q8NFJ9 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.86■□□□□ 0.77
BBS1Q8NFJ9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BBS1Q8NFJ9 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BBS1Q8NFJ9 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.86■□□□□ 0.77
BBS1Q8NFJ9 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.86■□□□□ 0.77
BBS1Q8NFJ9 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BBS1Q8NFJ9 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
BBS1Q8NFJ9 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
BBS1Q8NFJ9 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BBS1Q8NFJ9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.86■□□□□ 0.77
BBS1Q8NFJ9 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
BBS1Q8NFJ9 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
BBS1Q8NFJ9 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
BBS1Q8NFJ9 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.85■□□□□ 0.77
BBS1Q8NFJ9 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.85■□□□□ 0.77
BBS1Q8NFJ9 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BBS1Q8NFJ9 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
BBS1Q8NFJ9 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
BBS1Q8NFJ9 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BBS1Q8NFJ9 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BBS1Q8NFJ9 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.85■□□□□ 0.77
BBS1Q8NFJ9 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.84■□□□□ 0.77
BBS1Q8NFJ9 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BBS1Q8NFJ9 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BBS1Q8NFJ9 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
BBS1Q8NFJ9 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.84■□□□□ 0.77
BBS1Q8NFJ9 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.84■□□□□ 0.77
BBS1Q8NFJ9 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.84■□□□□ 0.77
BBS1Q8NFJ9 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.84■□□□□ 0.77
BBS1Q8NFJ9 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.84■□□□□ 0.77
BBS1Q8NFJ9 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.84■□□□□ 0.77
BBS1Q8NFJ9 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.84■□□□□ 0.77
BBS1Q8NFJ9 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BBS1Q8NFJ9 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BBS1Q8NFJ9 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BBS1Q8NFJ9 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
BBS1Q8NFJ9 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
BBS1Q8NFJ9 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
BBS1Q8NFJ9 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
BBS1Q8NFJ9 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
BBS1Q8NFJ9 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.83■□□□□ 0.77
BBS1Q8NFJ9 MIR4508-201ENST00000584178 70 ntBASIC19.83■□□□□ 0.77
BBS1Q8NFJ9 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
BBS1Q8NFJ9 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
BBS1Q8NFJ9 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
BBS1Q8NFJ9 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.83■□□□□ 0.76
BBS1Q8NFJ9 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
BBS1Q8NFJ9 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
BBS1Q8NFJ9 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
BBS1Q8NFJ9 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
BBS1Q8NFJ9 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.83■□□□□ 0.76
BBS1Q8NFJ9 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms