Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.53■■□□□ 1.04
RAB42Q8N4Z0 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.53■■□□□ 1.04
RAB42Q8N4Z0 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
RAB42Q8N4Z0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RAB42Q8N4Z0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RAB42Q8N4Z0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAB42Q8N4Z0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAB42Q8N4Z0 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAB42Q8N4Z0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAB42Q8N4Z0 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAB42Q8N4Z0 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.52■■□□□ 1.04
RAB42Q8N4Z0 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
RAB42Q8N4Z0 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAB42Q8N4Z0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.52■■□□□ 1.04
RAB42Q8N4Z0 AC133637.1-201ENST00000624115 1537 ntBASIC21.52■■□□□ 1.04
RAB42Q8N4Z0 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAB42Q8N4Z0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RAB42Q8N4Z0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RAB42Q8N4Z0 AL136162.1-201ENST00000607711 1078 ntBASIC21.52■■□□□ 1.04
RAB42Q8N4Z0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAB42Q8N4Z0 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAB42Q8N4Z0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.03
RAB42Q8N4Z0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
RAB42Q8N4Z0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.52■■□□□ 1.03
RAB42Q8N4Z0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.52■■□□□ 1.03
RAB42Q8N4Z0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RAB42Q8N4Z0 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.51■■□□□ 1.03
RAB42Q8N4Z0 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RAB42Q8N4Z0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.51■■□□□ 1.03
RAB42Q8N4Z0 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAB42Q8N4Z0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAB42Q8N4Z0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.51■■□□□ 1.03
RAB42Q8N4Z0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAB42Q8N4Z0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.51■■□□□ 1.03
RAB42Q8N4Z0 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAB42Q8N4Z0 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RAB42Q8N4Z0 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
RAB42Q8N4Z0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RAB42Q8N4Z0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RAB42Q8N4Z0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
RAB42Q8N4Z0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAB42Q8N4Z0 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAB42Q8N4Z0 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAB42Q8N4Z0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAB42Q8N4Z0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RAB42Q8N4Z0 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAB42Q8N4Z0 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAB42Q8N4Z0 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
RAB42Q8N4Z0 AC135279.3-201ENST00000610945 1311 ntBASIC21.5■■□□□ 1.03
RAB42Q8N4Z0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAB42Q8N4Z0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAB42Q8N4Z0 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAB42Q8N4Z0 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAB42Q8N4Z0 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAB42Q8N4Z0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.49■■□□□ 1.03
RAB42Q8N4Z0 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.49■■□□□ 1.03
RAB42Q8N4Z0 AC136469.2-201ENST00000623944 1028 ntBASIC21.49■■□□□ 1.03
RAB42Q8N4Z0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.49■■□□□ 1.03
RAB42Q8N4Z0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.49■■□□□ 1.03
RAB42Q8N4Z0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
RAB42Q8N4Z0 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
RAB42Q8N4Z0 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAB42Q8N4Z0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RAB42Q8N4Z0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAB42Q8N4Z0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.48■■□□□ 1.03
RAB42Q8N4Z0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.48■■□□□ 1.03
RAB42Q8N4Z0 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAB42Q8N4Z0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAB42Q8N4Z0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAB42Q8N4Z0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.48■■□□□ 1.03
RAB42Q8N4Z0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.48■■□□□ 1.03
RAB42Q8N4Z0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RAB42Q8N4Z0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.48■■□□□ 1.03
RAB42Q8N4Z0 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RAB42Q8N4Z0 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAB42Q8N4Z0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAB42Q8N4Z0 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RAB42Q8N4Z0 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
RAB42Q8N4Z0 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAB42Q8N4Z0 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAB42Q8N4Z0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.47■■□□□ 1.03
RAB42Q8N4Z0 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.47■■□□□ 1.03
RAB42Q8N4Z0 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAB42Q8N4Z0 PBX2P1-201ENST00000493219 1291 ntBASIC21.47■■□□□ 1.03
RAB42Q8N4Z0 AL139246.5-201ENST00000606645 996 ntBASIC21.47■■□□□ 1.03
RAB42Q8N4Z0 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAB42Q8N4Z0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAB42Q8N4Z0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAB42Q8N4Z0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.47■■□□□ 1.03
RAB42Q8N4Z0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.46■■□□□ 1.03
RAB42Q8N4Z0 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAB42Q8N4Z0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAB42Q8N4Z0 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAB42Q8N4Z0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
RAB42Q8N4Z0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAB42Q8N4Z0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.46■■□□□ 1.03
RAB42Q8N4Z0 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.46■■□□□ 1.03
RAB42Q8N4Z0 AC004687.1-201ENST00000579003 1625 ntBASIC21.46■■□□□ 1.03
RAB42Q8N4Z0 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RAB42Q8N4Z0 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms