Protein–RNA interactions for Protein: Q6W3E5

GDPD4, Glycerophosphodiester phosphodiesterase domain-containing protein 4, humanhuman

Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4Q6W3E5 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.29■■□□□ 1.16
GDPD4Q6W3E5 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
GDPD4Q6W3E5 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
GDPD4Q6W3E5 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
GDPD4Q6W3E5 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
GDPD4Q6W3E5 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
GDPD4Q6W3E5 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
GDPD4Q6W3E5 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
GDPD4Q6W3E5 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
GDPD4Q6W3E5 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
GDPD4Q6W3E5 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
GDPD4Q6W3E5 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
GDPD4Q6W3E5 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
GDPD4Q6W3E5 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.28■■□□□ 1.16
GDPD4Q6W3E5 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.28■■□□□ 1.16
GDPD4Q6W3E5 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
GDPD4Q6W3E5 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
GDPD4Q6W3E5 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
GDPD4Q6W3E5 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
GDPD4Q6W3E5 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.28■■□□□ 1.16
GDPD4Q6W3E5 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.28■■□□□ 1.16
GDPD4Q6W3E5 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
GDPD4Q6W3E5 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
GDPD4Q6W3E5 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
GDPD4Q6W3E5 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.27■■□□□ 1.16
GDPD4Q6W3E5 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
GDPD4Q6W3E5 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.27■■□□□ 1.16
GDPD4Q6W3E5 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
GDPD4Q6W3E5 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.27■■□□□ 1.16
GDPD4Q6W3E5 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.27■■□□□ 1.16
GDPD4Q6W3E5 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.27■■□□□ 1.16
GDPD4Q6W3E5 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
GDPD4Q6W3E5 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
GDPD4Q6W3E5 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
GDPD4Q6W3E5 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
GDPD4Q6W3E5 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.26■■□□□ 1.15
GDPD4Q6W3E5 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
GDPD4Q6W3E5 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.26■■□□□ 1.15
GDPD4Q6W3E5 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
GDPD4Q6W3E5 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
GDPD4Q6W3E5 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
GDPD4Q6W3E5 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
GDPD4Q6W3E5 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
GDPD4Q6W3E5 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
GDPD4Q6W3E5 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.25■■□□□ 1.15
GDPD4Q6W3E5 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.25■■□□□ 1.15
GDPD4Q6W3E5 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
GDPD4Q6W3E5 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
GDPD4Q6W3E5 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.25■■□□□ 1.15
GDPD4Q6W3E5 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.25■■□□□ 1.15
GDPD4Q6W3E5 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
GDPD4Q6W3E5 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
GDPD4Q6W3E5 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.24■■□□□ 1.15
GDPD4Q6W3E5 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
GDPD4Q6W3E5 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.24■■□□□ 1.15
GDPD4Q6W3E5 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
GDPD4Q6W3E5 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.24■■□□□ 1.15
GDPD4Q6W3E5 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.24■■□□□ 1.15
GDPD4Q6W3E5 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.24■■□□□ 1.15
GDPD4Q6W3E5 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
GDPD4Q6W3E5 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
GDPD4Q6W3E5 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
GDPD4Q6W3E5 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
GDPD4Q6W3E5 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
GDPD4Q6W3E5 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
GDPD4Q6W3E5 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
GDPD4Q6W3E5 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.23■■□□□ 1.15
GDPD4Q6W3E5 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
GDPD4Q6W3E5 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.23■■□□□ 1.15
GDPD4Q6W3E5 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
GDPD4Q6W3E5 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.23■■□□□ 1.15
GDPD4Q6W3E5 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.23■■□□□ 1.15
GDPD4Q6W3E5 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
GDPD4Q6W3E5 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.22■■□□□ 1.15
GDPD4Q6W3E5 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
GDPD4Q6W3E5 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
GDPD4Q6W3E5 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
GDPD4Q6W3E5 MIR935-201ENST00000401179 91 ntBASIC22.22■■□□□ 1.15
GDPD4Q6W3E5 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
GDPD4Q6W3E5 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.22■■□□□ 1.15
GDPD4Q6W3E5 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
GDPD4Q6W3E5 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.22■■□□□ 1.15
GDPD4Q6W3E5 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.22■■□□□ 1.15
GDPD4Q6W3E5 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
GDPD4Q6W3E5 TSPY26P-201ENST00000476365 1326 ntBASIC22.22■■□□□ 1.15
GDPD4Q6W3E5 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
GDPD4Q6W3E5 DUSP8P3-201ENST00000399571 1760 ntBASIC22.22■■□□□ 1.15
GDPD4Q6W3E5 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
GDPD4Q6W3E5 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
GDPD4Q6W3E5 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
GDPD4Q6W3E5 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
GDPD4Q6W3E5 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.21■■□□□ 1.15
GDPD4Q6W3E5 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.21■■□□□ 1.15
GDPD4Q6W3E5 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.21■■□□□ 1.15
GDPD4Q6W3E5 IGHV3-19-201ENST00000521488 291 ntBASIC22.21■■□□□ 1.15
GDPD4Q6W3E5 AP005435.1-201ENST00000529293 1178 ntBASIC22.21■■□□□ 1.15
GDPD4Q6W3E5 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC22.21■■□□□ 1.15
GDPD4Q6W3E5 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
GDPD4Q6W3E5 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
GDPD4Q6W3E5 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms