Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC12.43□□□□□ -0.42
UBR4Q5T4S7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC12.43□□□□□ -0.42
UBR4Q5T4S7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC12.43□□□□□ -0.42
UBR4Q5T4S7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC12.42□□□□□ -0.42
UBR4Q5T4S7 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
UBR4Q5T4S7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
UBR4Q5T4S7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
UBR4Q5T4S7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
UBR4Q5T4S7 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC12.42□□□□□ -0.42
UBR4Q5T4S7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
UBR4Q5T4S7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBR4Q5T4S7 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC12.42□□□□□ -0.42
UBR4Q5T4S7 AC006538.3-201ENST00000612495 578 ntBASIC12.42□□□□□ -0.42
UBR4Q5T4S7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC12.42□□□□□ -0.42
UBR4Q5T4S7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC12.42□□□□□ -0.42
UBR4Q5T4S7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC12.42□□□□□ -0.42
UBR4Q5T4S7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
UBR4Q5T4S7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC12.42□□□□□ -0.42
UBR4Q5T4S7 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC12.42□□□□□ -0.42
UBR4Q5T4S7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC12.42□□□□□ -0.42
UBR4Q5T4S7 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC12.42□□□□□ -0.42
UBR4Q5T4S7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC12.42□□□□□ -0.42
UBR4Q5T4S7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC12.42□□□□□ -0.42
UBR4Q5T4S7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBR4Q5T4S7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
UBR4Q5T4S7 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC12.42□□□□□ -0.42
UBR4Q5T4S7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
UBR4Q5T4S7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBR4Q5T4S7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBR4Q5T4S7 AC141586.4-201ENST00000624558 1573 ntBASIC12.42□□□□□ -0.42
UBR4Q5T4S7 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBR4Q5T4S7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC12.41□□□□□ -0.42
UBR4Q5T4S7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBR4Q5T4S7 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
UBR4Q5T4S7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC12.41□□□□□ -0.42
UBR4Q5T4S7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC12.41□□□□□ -0.42
UBR4Q5T4S7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
UBR4Q5T4S7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
UBR4Q5T4S7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC12.41□□□□□ -0.42
UBR4Q5T4S7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
UBR4Q5T4S7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBR4Q5T4S7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
UBR4Q5T4S7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBR4Q5T4S7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC12.41□□□□□ -0.42
UBR4Q5T4S7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
UBR4Q5T4S7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
UBR4Q5T4S7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC12.41□□□□□ -0.42
UBR4Q5T4S7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC12.41□□□□□ -0.42
UBR4Q5T4S7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
UBR4Q5T4S7 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UBR4Q5T4S7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
UBR4Q5T4S7 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UBR4Q5T4S7 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC12.4□□□□□ -0.42
UBR4Q5T4S7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
UBR4Q5T4S7 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC12.4□□□□□ -0.42
UBR4Q5T4S7 TSPY15P-201ENST00000457163 923 ntBASIC12.4□□□□□ -0.42
UBR4Q5T4S7 AC026366.1-201ENST00000488803 879 ntBASIC12.4□□□□□ -0.42
UBR4Q5T4S7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC12.4□□□□□ -0.42
UBR4Q5T4S7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UBR4Q5T4S7 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
UBR4Q5T4S7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
UBR4Q5T4S7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBR4Q5T4S7 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
UBR4Q5T4S7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
UBR4Q5T4S7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC12.39□□□□□ -0.43
UBR4Q5T4S7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
UBR4Q5T4S7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
UBR4Q5T4S7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBR4Q5T4S7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBR4Q5T4S7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBR4Q5T4S7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC12.39□□□□□ -0.43
UBR4Q5T4S7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC12.39□□□□□ -0.43
UBR4Q5T4S7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
UBR4Q5T4S7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBR4Q5T4S7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBR4Q5T4S7 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC12.39□□□□□ -0.43
UBR4Q5T4S7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBR4Q5T4S7 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
UBR4Q5T4S7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBR4Q5T4S7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC12.39□□□□□ -0.43
UBR4Q5T4S7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
UBR4Q5T4S7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC12.38□□□□□ -0.43
UBR4Q5T4S7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC12.38□□□□□ -0.43
UBR4Q5T4S7 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBR4Q5T4S7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC12.38□□□□□ -0.43
UBR4Q5T4S7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC12.38□□□□□ -0.43
UBR4Q5T4S7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBR4Q5T4S7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBR4Q5T4S7 APTR-203ENST00000430801 583 ntTSL 5 BASIC12.38□□□□□ -0.43
UBR4Q5T4S7 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC12.38□□□□□ -0.43
UBR4Q5T4S7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC12.38□□□□□ -0.43
UBR4Q5T4S7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBR4Q5T4S7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
UBR4Q5T4S7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
UBR4Q5T4S7 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
UBR4Q5T4S7 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
UBR4Q5T4S7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC12.38□□□□□ -0.43
UBR4Q5T4S7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBR4Q5T4S7 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBR4Q5T4S7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 253.3 ms