Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 YNL095CYNL095C 1929 nt5.74□□□□□ -1.49
UBP3Q01477 BRE2YLR015W 1518 nt5.74□□□□□ -1.49 RIP-Chip
UBP3Q01477 UBA1YKL210W 3075 nt5.73□□□□□ -1.49 RIP-Chip
UBP3Q01477 RAD53YPL153C 2466 nt5.73□□□□□ -1.49
UBP3Q01477 HPC2YBR215W 1878 nt5.73□□□□□ -1.49
UBP3Q01477 DAS2YDR020C 699 nt5.73□□□□□ -1.49
UBP3Q01477 RRP8YDR083W 1179 nt5.73□□□□□ -1.49
UBP3Q01477 YGR111WYGR111W 1203 nt5.73□□□□□ -1.49
UBP3Q01477 YHR214C-DYHR214C-D 294 nt5.73□□□□□ -1.49
UBP3Q01477 YAR069CYAR069C 294 nt5.73□□□□□ -1.49
UBP3Q01477 NRM1YNR009W 750 nt5.73□□□□□ -1.49
UBP3Q01477 GPM3YOL056W 912 nt5.73□□□□□ -1.49
UBP3Q01477 ART10YLR392C 1557 nt5.72□□□□□ -1.49
UBP3Q01477 TRP3YKL211C 1455 nt5.72□□□□□ -1.49
UBP3Q01477 TRM1YDR120C 1713 nt5.72□□□□□ -1.49
UBP3Q01477 ARP2YDL029W 1176 nt5.72□□□□□ -1.49
UBP3Q01477 COBQ0105 1158 nt5.72□□□□□ -1.49
UBP3Q01477 YGR016WYGR016W 573 nt5.72□□□□□ -1.49
UBP3Q01477 YHR127WYHR127W 732 nt5.72□□□□□ -1.49
UBP3Q01477 PGU1YJR153W 1086 nt5.72□□□□□ -1.49
UBP3Q01477 PNT1YOR266W 1272 nt5.72□□□□□ -1.49
UBP3Q01477 CBC2YPL178W 627 nt5.72□□□□□ -1.49
UBP3Q01477 RSA1YPL193W 1146 nt5.72□□□□□ -1.49 RIP-Chip
UBP3Q01477 YBR255C-AYBR255C-A 363 nt5.72□□□□□ -1.49
UBP3Q01477 SMF1YOL122C 1728 nt5.71□□□□□ -1.49
UBP3Q01477 OCA5YHL029C 2040 nt5.71□□□□□ -1.5
UBP3Q01477 YCR050CYCR050C 309 nt5.71□□□□□ -1.5
UBP3Q01477 NRG1YDR043C 696 nt5.71□□□□□ -1.5
UBP3Q01477 YDR524W-CYDR524W-C 90 nt5.71□□□□□ -1.5
UBP3Q01477 YFR032C-BYFR032C-B 264 nt5.71□□□□□ -1.5
UBP3Q01477 CDC43YGL155W 1131 nt5.71□□□□□ -1.5 RIP-Chip
UBP3Q01477 PRP38YGR075C 729 nt5.71□□□□□ -1.5
UBP3Q01477 DBP8YHR169W 1296 nt5.71□□□□□ -1.5
UBP3Q01477 REC102YLR329W 795 nt5.71□□□□□ -1.5
UBP3Q01477 YNL320WYNL320W 855 nt5.71□□□□□ -1.5
UBP3Q01477 SSA2YLL024C 1920 nt5.71□□□□□ -1.5
UBP3Q01477 LEU1YGL009C 2340 nt5.71□□□□□ -1.5
UBP3Q01477 TIM54YJL054W 1437 nt5.71□□□□□ -1.5
UBP3Q01477 ACC1YNR016C 6702 nt5.71□□□□□ -1.5
UBP3Q01477 RPT2YDL007W 1314 nt5.71□□□□□ -1.5
UBP3Q01477 YDR261W-AYDR261W-A 1317 nt5.71□□□□□ -1.5
UBP3Q01477 DBF4YDR052C 2115 nt5.71□□□□□ -1.5
UBP3Q01477 ALD3YMR169C 1521 nt5.7□□□□□ -1.5
UBP3Q01477 ALD2YMR170C 1521 nt5.7□□□□□ -1.5 RIP-Chip
UBP3Q01477 SRT1YMR101C 1032 nt5.7□□□□□ -1.5
UBP3Q01477 NRK1YNL129W 723 nt5.7□□□□□ -1.5 RIP-Chip
UBP3Q01477 SPS19YNL202W 879 nt5.7□□□□□ -1.5
UBP3Q01477 ERI1YPL096C-A 207 nt5.7□□□□□ -1.5
UBP3Q01477 GRE1YPL223C 507 nt5.7□□□□□ -1.5
UBP3Q01477 YPR147CYPR147C 915 nt5.7□□□□□ -1.5
UBP3Q01477 RKM2YDR198C 1440 nt5.7□□□□□ -1.5 RIP-Chip
UBP3Q01477 RFA1YAR007C 1866 nt5.7□□□□□ -1.5 RIP-Chip
UBP3Q01477 POL31YJR006W 1464 nt5.7□□□□□ -1.5
UBP3Q01477 PMT4YJR143C 2289 nt5.69□□□□□ -1.5
UBP3Q01477 NSA1YGL111W 1392 nt5.69□□□□□ -1.5 RIP-Chip
UBP3Q01477 RGT1YKL038W 3513 nt5.69□□□□□ -1.5 RIP-Chip
UBP3Q01477 PHO8YDR481C 1701 nt5.69□□□□□ -1.5
UBP3Q01477 CYK3YDL117W 2658 nt5.69□□□□□ -1.5 RIP-Chip
UBP3Q01477 GLO2YDR272W 825 nt5.69□□□□□ -1.5
UBP3Q01477 NPY1YGL067W 1155 nt5.69□□□□□ -1.5
UBP3Q01477 YGL132WYGL132W 336 nt5.69□□□□□ -1.5
UBP3Q01477 COG2YGR120C 789 nt5.69□□□□□ -1.5
UBP3Q01477 VMA22YHR060W 546 nt5.69□□□□□ -1.5
UBP3Q01477 HTD2YHR067W 843 nt5.69□□□□□ -1.5
UBP3Q01477 AIM25YJR100C 984 nt5.69□□□□□ -1.5
UBP3Q01477 CCE1YKL011C 1062 nt5.69□□□□□ -1.5 RIP-Chip
UBP3Q01477 YLR125WYLR125W 411 nt5.69□□□□□ -1.5
UBP3Q01477 CCS1YMR038C 750 nt5.69□□□□□ -1.5
UBP3Q01477 HOR7YMR251W-A 180 nt5.69□□□□□ -1.5
UBP3Q01477 SUL2YLR092W 2682 nt5.69□□□□□ -1.5 RIP-Chip
UBP3Q01477 SPS2YDR522C 1509 nt5.69□□□□□ -1.5
UBP3Q01477 ULA1YPL003W 1389 nt5.68□□□□□ -1.5
UBP3Q01477 HSP82YPL240C 2130 nt5.68□□□□□ -1.5
UBP3Q01477 SPT3YDR392W 1014 nt5.68□□□□□ -1.5
UBP3Q01477 YHR175W-AYHR175W-A 150 nt5.68□□□□□ -1.5
UBP3Q01477 PRP21YJL203W 843 nt5.68□□□□□ -1.5 RIP-Chip
UBP3Q01477 FIP1YJR093C 984 nt5.68□□□□□ -1.5
UBP3Q01477 GCD7YLR291C 1146 nt5.68□□□□□ -1.5
UBP3Q01477 YNL019CYNL019C 855 nt5.68□□□□□ -1.5
UBP3Q01477 YNL033WYNL033W 855 nt5.68□□□□□ -1.5
UBP3Q01477 MDJ2YNL328C 441 nt5.68□□□□□ -1.5
UBP3Q01477 YOR364WYOR364W 369 nt5.68□□□□□ -1.5
UBP3Q01477 RXT2YBR095C 1293 nt5.68□□□□□ -1.5 RIP-Chip
UBP3Q01477 SIP5YMR140W 1470 nt5.68□□□□□ -1.5
UBP3Q01477 ENT1YDL161W 1365 nt5.67□□□□□ -1.5
UBP3Q01477 PUF2YPR042C 3228 nt5.67□□□□□ -1.5 RIP-Chip
UBP3Q01477 PUT1YLR142W 1431 nt5.67□□□□□ -1.5 RIP-Chip
UBP3Q01477 RKM3YBR030W 1659 nt5.67□□□□□ -1.5
UBP3Q01477 YDL016CYDL016C 303 nt5.67□□□□□ -1.5
UBP3Q01477 CRD1YDL142C 852 nt5.67□□□□□ -1.5
UBP3Q01477 GCS1YDL226C 1059 nt5.67□□□□□ -1.5
UBP3Q01477 CTH1YDR151C 978 nt5.67□□□□□ -1.5
UBP3Q01477 CWC23YGL128C 852 nt5.67□□□□□ -1.5 RIP-Chip
UBP3Q01477 BET1YIL004C 429 nt5.67□□□□□ -1.5 RIP-Chip
UBP3Q01477 YKL151CYKL151C 1014 nt5.67□□□□□ -1.5 RIP-Chip
UBP3Q01477 YOR283WYOR283W 693 nt5.67□□□□□ -1.5
UBP3Q01477 MUM2YBR057C 1101 nt5.67□□□□□ -1.5
UBP3Q01477 ECM33YBR078W 1290 nt5.67□□□□□ -1.5
UBP3Q01477 YBR116CYBR116C 528 nt5.67□□□□□ -1.5
UBP3Q01477 TDA11YHR159W 1515 nt5.67□□□□□ -1.5 RIP-Chip
Retrieved 100 of 7,029 protein–RNA pairs in 24.4 ms