RNA–Protein interactions for RNA: YDL117W

CYK3, Transcript of SH3-domain protein located in the bud neck and cytokinetic actin ring, yeastyeast

Gene CYK3, Length 2,658 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CYK3YDL117W RQC2Q12532 1038 aaKnown RBP8.59□□□□□ -1.03
CYK3YDL117W BFR2Q06631 534 aaKnown RBP8.35□□□□□ -1.07
CYK3YDL117W DRS1P32892 752 aaKnown RBP8.1□□□□□ -1.11
CYK3YDL117W TAF7Q05021 590 aa7.99□□□□□ -1.13
CYK3YDL117W TFA1P36100 482 aa7.98□□□□□ -1.13
CYK3YDL117W URN1Q06525 465 aaKnown RBP7.66□□□□□ -1.18
CYK3YDL117W MTC1P47018 478 aaKnown RBP7.52□□□□□ -1.21
CYK3YDL117W EBP2P36049 427 aaKnown RBP7.44□□□□□ -1.22
CYK3YDL117W CAB3P36076 571 aa7.41□□□□□ -1.22
CYK3YDL117W NOP2P40991 618 aaKnown RBP7.4□□□□□ -1.23
CYK3YDL117W SIS2P36024 562 aa7.39□□□□□ -1.23
CYK3YDL117W YFR016CP43597 1233 aaKnown RBP7.18□□□□□ -1.26
CYK3YDL117W AVT3P36062 692 aa7.12□□□□□ -1.27
CYK3YDL117W LEO1P38439 464 aa7.07□□□□□ -1.28
CYK3YDL117W RPS0BP46654 252 aaKnown RBP7.05□□□□□ -1.28
CYK3YDL117W DMA1P38823 416 aa7.04□□□□□ -1.28
CYK3YDL117W YRB30P53107 440 aaPredicted RBP7.03□□□□□ -1.28
CYK3YDL117W DIP2Q12220 943 aaPredicted RBP6.98□□□□□ -1.29
CYK3YDL117W NSR1P27476 414 aaKnown RBP RIP-Chip data6.97□□□□□ -1.29not detected
CYK3YDL117W MON2P48563 1636 aaPredicted RBP6.97□□□□□ -1.29
CYK3YDL117W KRI1P42846 591 aaKnown RBP6.96□□□□□ -1.3
CYK3YDL117W YPR148CQ06523 435 aa6.96□□□□□ -1.3
CYK3YDL117W NAP1P25293 417 aaKnown RBP6.9□□□□□ -1.31
CYK3YDL117W IOC4Q04213 475 aa6.87□□□□□ -1.31
CYK3YDL117W CWC22P53333 577 aaKnown RBP6.86□□□□□ -1.31
CYK3YDL117W MNN4P36044 1178 aa6.77□□□□□ -1.33
CYK3YDL117W DEF1P35732 738 aaKnown RBP6.74□□□□□ -1.33
CYK3YDL117W IFH1P39520 1085 aa6.72□□□□□ -1.33
CYK3YDL117W TCB2P48231 1178 aa6.72□□□□□ -1.33
CYK3YDL117W AIM44Q99299 758 aa6.69□□□□□ -1.34
CYK3YDL117W ENV11P53246 860 aa6.68□□□□□ -1.34
CYK3YDL117W INO80P53115 1489 aa6.68□□□□□ -1.34
CYK3YDL117W PSH1Q12161 406 aa6.67□□□□□ -1.34
CYK3YDL117W RSE1Q04693 1361 aaKnown RBP6.66□□□□□ -1.34
CYK3YDL117W NUG1P40010 520 aaKnown RBP6.64□□□□□ -1.35
CYK3YDL117W ORC1P54784 914 aaPredicted RBP6.62□□□□□ -1.35
CYK3YDL117W NOP53Q12080 455 aaKnown RBP6.62□□□□□ -1.35
CYK3YDL117W RLF2Q12495 606 aa6.61□□□□□ -1.35
CYK3YDL117W SNU71P53207 620 aaKnown RBP6.6□□□□□ -1.35
CYK3YDL117W RLP24Q07915 199 aaKnown RBP6.58□□□□□ -1.36
CYK3YDL117W SPT7P35177 1332 aa6.57□□□□□ -1.36
CYK3YDL117W TOP1P04786 769 aa6.56□□□□□ -1.36
CYK3YDL117W SPT2P06843 333 aaPredicted RBP6.56□□□□□ -1.36
CYK3YDL117W QCR6P00127 147 aa6.56□□□□□ -1.36
CYK3YDL117W ABP1P15891 592 aaKnown RBP6.54□□□□□ -1.36
CYK3YDL117W SKI3P17883 1432 aaKnown RBP6.53□□□□□ -1.36
CYK3YDL117W HSP82P02829 709 aaKnown RBP6.53□□□□□ -1.36
CYK3YDL117W LEU3P08638 886 aa6.53□□□□□ -1.36
CYK3YDL117W YGR130CP53278 816 aa6.53□□□□□ -1.36
CYK3YDL117W FPR3P38911 411 aaKnown RBP6.52□□□□□ -1.37
CYK3YDL117W MDG1P53885 366 aa6.51□□□□□ -1.37
CYK3YDL117W PLP2Q12017 286 aa6.51□□□□□ -1.37
CYK3YDL117W RNA1P11745 407 aaKnown RBP6.5□□□□□ -1.37
CYK3YDL117W FPR4Q06205 392 aaPredicted RBP6.5□□□□□ -1.37
CYK3YDL117W ENP1P38333 483 aaKnown RBP6.49□□□□□ -1.37
CYK3YDL117W SPT21P35209 758 aa6.49□□□□□ -1.37
CYK3YDL117W SWR1Q05471 1514 aa6.48□□□□□ -1.37
CYK3YDL117W DMA2P53924 522 aa6.48□□□□□ -1.37
CYK3YDL117W TY1B-DR4Q07793 1604 aa6.47□□□□□ -1.37
CYK3YDL117W RPN1P38764 993 aaKnown RBP6.47□□□□□ -1.37
CYK3YDL117W RIX1P38883 763 aaPredicted RBP6.47□□□□□ -1.37
CYK3YDL117W FUN12P39730 1002 aaKnown RBP6.47□□□□□ -1.37
CYK3YDL117W KOG1P38873 1557 aa6.46□□□□□ -1.37
CYK3YDL117W SEC3P33332 1336 aaKnown RBP6.45□□□□□ -1.38
CYK3YDL117W TCB3Q03640 1545 aaKnown RBP6.44□□□□□ -1.38
CYK3YDL117W CLC1P17891 233 aa6.43□□□□□ -1.38
CYK3YDL117W DNA2P38859 1522 aa6.43□□□□□ -1.38
CYK3YDL117W RPS0AP32905 252 aaKnown RBP6.42□□□□□ -1.38
CYK3YDL117W YTA7P40340 1379 aa6.41□□□□□ -1.38
CYK3YDL117W SPC110P32380 944 aa6.41□□□□□ -1.38
CYK3YDL117W HIF1Q12373 385 aa6.41□□□□□ -1.38
CYK3YDL117W NMD2P38798 1089 aaKnown RBP6.4□□□□□ -1.38
CYK3YDL117W YNL011CP53980 444 aa6.4□□□□□ -1.38
CYK3YDL117W TIF4632P39936 914 aaKnown RBP6.4□□□□□ -1.39
CYK3YDL117W PIL1P53252 339 aaKnown RBP6.39□□□□□ -1.39
CYK3YDL117W TOA1P32773 286 aa6.38□□□□□ -1.39
CYK3YDL117W GRX3Q03835 250 aa6.38□□□□□ -1.39
CYK3YDL117W GIN4Q12263 1142 aa6.36□□□□□ -1.39
CYK3YDL117W NHA1Q99271 985 aa6.35□□□□□ -1.39
CYK3YDL117W VPS4P52917 437 aa6.34□□□□□ -1.39
CYK3YDL117W TLG1Q03322 224 aa6.34□□□□□ -1.39
CYK3YDL117W SGS1P35187 1447 aa6.34□□□□□ -1.39
CYK3YDL117W SUB1P54000 292 aaKnown RBP6.33□□□□□ -1.4
CYK3YDL117W IME2P32581 645 aa6.33□□□□□ -1.4
CYK3YDL117W SSA1P10591 642 aaKnown RBP6.32□□□□□ -1.4
CYK3YDL117W SSA2P10592 639 aaKnown RBP6.32□□□□□ -1.4
CYK3YDL117W SAS10Q12136 610 aaPredicted RBP6.32□□□□□ -1.4
CYK3YDL117W ETT1Q08421 412 aaKnown RBP6.31□□□□□ -1.4
CYK3YDL117W YSH1Q06224 779 aaPredicted RBP6.3□□□□□ -1.4
CYK3YDL117W SPT16P32558 1035 aaKnown RBP6.29□□□□□ -1.4
CYK3YDL117W SWE1P32944 819 aa6.29□□□□□ -1.4
CYK3YDL117W NNF2P53253 936 aa6.29□□□□□ -1.4
CYK3YDL117W DOS2P54858 310 aa6.26□□□□□ -1.41
CYK3YDL117W MSH4P40965 878 aaPredicted RBP6.26□□□□□ -1.41
CYK3YDL117W NST1P53935 1240 aa6.25□□□□□ -1.41
CYK3YDL117W BRL1P38770 471 aa6.24□□□□□ -1.41
CYK3YDL117W MPP10P47083 593 aaKnown RBP6.24□□□□□ -1.41
CYK3YDL117W SPA2P23201 1466 aaKnown RBP6.23□□□□□ -1.41
CYK3YDL117W MSH3P25336 1018 aa6.22□□□□□ -1.41
CYK3YDL117W STH1P32597 1359 aa6.22□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms