Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
RPS4XP62701 LINC01529-204ENST00000636474 1715 ntBASIC20.03■□□□□ 0.8
RPS4XP62701 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.03■□□□□ 0.8
RPS4XP62701 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RPS4XP62701 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RPS4XP62701 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPS4XP62701 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPS4XP62701 FP325331.1-202ENST00000623531 1380 ntBASIC20.03■□□□□ 0.8
RPS4XP62701 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPS4XP62701 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPS4XP62701 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPS4XP62701 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPS4XP62701 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RPS4XP62701 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RPS4XP62701 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RPS4XP62701 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPS4XP62701 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.02■□□□□ 0.8
RPS4XP62701 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.02■□□□□ 0.8
RPS4XP62701 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPS4XP62701 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPS4XP62701 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPS4XP62701 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPS4XP62701 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPS4XP62701 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPS4XP62701 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
RPS4XP62701 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
RPS4XP62701 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.01■□□□□ 0.79
RPS4XP62701 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.01■□□□□ 0.79
RPS4XP62701 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RPS4XP62701 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPS4XP62701 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPS4XP62701 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RPS4XP62701 LINC00526-201ENST00000581067 1875 ntBASIC20.01■□□□□ 0.79
RPS4XP62701 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPS4XP62701 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
RPS4XP62701 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20■□□□□ 0.79
RPS4XP62701 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
RPS4XP62701 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20■□□□□ 0.79
RPS4XP62701 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20■□□□□ 0.79
RPS4XP62701 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20■□□□□ 0.79
RPS4XP62701 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20■□□□□ 0.79
RPS4XP62701 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20■□□□□ 0.79
RPS4XP62701 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20■□□□□ 0.79
RPS4XP62701 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20■□□□□ 0.79
RPS4XP62701 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20■□□□□ 0.79
RPS4XP62701 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20■□□□□ 0.79
RPS4XP62701 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPS4XP62701 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
RPS4XP62701 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPS4XP62701 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPS4XP62701 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
RPS4XP62701 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.99■□□□□ 0.79
RPS4XP62701 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RPS4XP62701 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
RPS4XP62701 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPS4XP62701 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
RPS4XP62701 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.99■□□□□ 0.79
RPS4XP62701 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.99■□□□□ 0.79
RPS4XP62701 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
RPS4XP62701 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPS4XP62701 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RPS4XP62701 AC242852.2-201ENST00000615738 1807 ntBASIC19.99■□□□□ 0.79
RPS4XP62701 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RPS4XP62701 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.98■□□□□ 0.79
RPS4XP62701 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.98■□□□□ 0.79
RPS4XP62701 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
RPS4XP62701 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.98■□□□□ 0.79
RPS4XP62701 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.98■□□□□ 0.79
RPS4XP62701 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.98■□□□□ 0.79
RPS4XP62701 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
RPS4XP62701 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPS4XP62701 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RPS4XP62701 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPS4XP62701 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.98■□□□□ 0.79
RPS4XP62701 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPS4XP62701 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RPS4XP62701 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RPS4XP62701 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RPS4XP62701 DUX4L4-201ENST00000566884 1269 ntBASIC19.97■□□□□ 0.79
RPS4XP62701 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPS4XP62701 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPS4XP62701 AC009102.2-201ENST00000606772 1639 ntBASIC19.97■□□□□ 0.79
RPS4XP62701 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RPS4XP62701 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RPS4XP62701 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RPS4XP62701 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.96■□□□□ 0.79
RPS4XP62701 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPS4XP62701 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPS4XP62701 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.96■□□□□ 0.79
RPS4XP62701 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPS4XP62701 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.96■□□□□ 0.79
RPS4XP62701 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
RPS4XP62701 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RPS4XP62701 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RPS4XP62701 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.95■□□□□ 0.78
RPS4XP62701 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RPS4XP62701 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPS4XP62701 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.95■□□□□ 0.78
RPS4XP62701 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPS4XP62701 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms