Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
NCKAP1LP55160 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC24.36■■□□□ 1.49
NCKAP1LP55160 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
NCKAP1LP55160 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.36■■□□□ 1.49
NCKAP1LP55160 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC24.36■■□□□ 1.49
NCKAP1LP55160 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
NCKAP1LP55160 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
NCKAP1LP55160 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC24.36■■□□□ 1.49
NCKAP1LP55160 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
NCKAP1LP55160 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC24.36■■□□□ 1.49
NCKAP1LP55160 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
NCKAP1LP55160 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
NCKAP1LP55160 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
NCKAP1LP55160 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
NCKAP1LP55160 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
NCKAP1LP55160 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
NCKAP1LP55160 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC24.35■■□□□ 1.49
NCKAP1LP55160 AC133561.4-201ENST00000566112 224 ntBASIC24.35■■□□□ 1.49
NCKAP1LP55160 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
NCKAP1LP55160 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC24.35■■□□□ 1.49
NCKAP1LP55160 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.34■■□□□ 1.49
NCKAP1LP55160 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
NCKAP1LP55160 OR2I1P-207ENST00000453522 948 ntBASIC24.34■■□□□ 1.49
NCKAP1LP55160 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC24.34■■□□□ 1.49
NCKAP1LP55160 AL031432.3-201ENST00000607698 485 ntBASIC24.34■■□□□ 1.49
NCKAP1LP55160 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
NCKAP1LP55160 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
NCKAP1LP55160 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
NCKAP1LP55160 GCA-201ENST00000233612 1694 ntTSL 2 BASIC24.34■■□□□ 1.49
NCKAP1LP55160 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
NCKAP1LP55160 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.49
NCKAP1LP55160 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
NCKAP1LP55160 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
NCKAP1LP55160 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC24.33■■□□□ 1.49
NCKAP1LP55160 SNX3-202ENST00000349379 890 ntTSL 2 BASIC24.33■■□□□ 1.49
NCKAP1LP55160 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC24.33■■□□□ 1.49
NCKAP1LP55160 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC24.33■■□□□ 1.49
NCKAP1LP55160 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
NCKAP1LP55160 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
NCKAP1LP55160 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
NCKAP1LP55160 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC24.32■■□□□ 1.48
NCKAP1LP55160 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC24.32■■□□□ 1.48
NCKAP1LP55160 RALB-208ENST00000631312 311 ntTSL 5 BASIC24.32■■□□□ 1.48
NCKAP1LP55160 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC24.32■■□□□ 1.48
NCKAP1LP55160 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
NCKAP1LP55160 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
NCKAP1LP55160 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
NCKAP1LP55160 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
NCKAP1LP55160 EDA-201ENST00000338901 1233 ntBASIC24.31■■□□□ 1.48
NCKAP1LP55160 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
NCKAP1LP55160 MIR638-201ENST00000385237 100 ntBASIC24.31■■□□□ 1.48
NCKAP1LP55160 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
NCKAP1LP55160 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
NCKAP1LP55160 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC24.31■■□□□ 1.48
NCKAP1LP55160 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC24.31■■□□□ 1.48
NCKAP1LP55160 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.31■■□□□ 1.48
NCKAP1LP55160 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC24.3■■□□□ 1.48
NCKAP1LP55160 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
NCKAP1LP55160 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NCKAP1LP55160 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
NCKAP1LP55160 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NCKAP1LP55160 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC24.3■■□□□ 1.48
NCKAP1LP55160 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
NCKAP1LP55160 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC24.3■■□□□ 1.48
NCKAP1LP55160 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
NCKAP1LP55160 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC24.3■■□□□ 1.48
NCKAP1LP55160 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC24.3■■□□□ 1.48
NCKAP1LP55160 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC24.29■■□□□ 1.48
NCKAP1LP55160 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC24.29■■□□□ 1.48
NCKAP1LP55160 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
NCKAP1LP55160 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC24.29■■□□□ 1.48
NCKAP1LP55160 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
NCKAP1LP55160 STX4-202ENST00000394998 1498 ntTSL 2 BASIC24.29■■□□□ 1.48
NCKAP1LP55160 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
NCKAP1LP55160 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
NCKAP1LP55160 ME2-208ENST00000638937 2471 ntTSL 5 BASIC24.29■■□□□ 1.48
NCKAP1LP55160 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC24.29■■□□□ 1.48
NCKAP1LP55160 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.29■■□□□ 1.48
NCKAP1LP55160 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
NCKAP1LP55160 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC24.29■■□□□ 1.48
NCKAP1LP55160 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
NCKAP1LP55160 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
NCKAP1LP55160 SLC47A1P1-202ENST00000449666 945 ntBASIC24.28■■□□□ 1.48
NCKAP1LP55160 AC010525.1-201ENST00000585559 441 ntBASIC24.28■■□□□ 1.48
NCKAP1LP55160 GRAMD4P4-201ENST00000613563 1115 ntBASIC24.28■■□□□ 1.48
NCKAP1LP55160 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
NCKAP1LP55160 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
NCKAP1LP55160 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC24.28■■□□□ 1.48
NCKAP1LP55160 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC24.28■■□□□ 1.48
NCKAP1LP55160 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC24.28■■□□□ 1.48
NCKAP1LP55160 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
NCKAP1LP55160 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
NCKAP1LP55160 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
NCKAP1LP55160 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
NCKAP1LP55160 BX842568.3-201ENST00000418104 571 ntBASIC24.27■■□□□ 1.48
NCKAP1LP55160 AP001330.3-201ENST00000520123 633 ntBASIC24.27■■□□□ 1.48
NCKAP1LP55160 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
NCKAP1LP55160 AL355001.2-201ENST00000620617 1191 ntBASIC24.27■■□□□ 1.48
NCKAP1LP55160 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
NCKAP1LP55160 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC24.27■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms