Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NR1H2P55055 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NR1H2P55055 C11orf96-202ENST00000528572 1834 ntBASIC20.86■□□□□ 0.93
NR1H2P55055 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.86■□□□□ 0.93
NR1H2P55055 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.86■□□□□ 0.93
NR1H2P55055 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.86■□□□□ 0.93
NR1H2P55055 FBXW4P1-201ENST00000426721 2239 ntBASIC20.86■□□□□ 0.93
NR1H2P55055 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NR1H2P55055 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.86■□□□□ 0.93
NR1H2P55055 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NR1H2P55055 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
NR1H2P55055 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NR1H2P55055 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
NR1H2P55055 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NR1H2P55055 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
NR1H2P55055 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NR1H2P55055 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.85■□□□□ 0.93
NR1H2P55055 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
NR1H2P55055 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NR1H2P55055 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.85■□□□□ 0.93
NR1H2P55055 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.85■□□□□ 0.93
NR1H2P55055 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NR1H2P55055 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
NR1H2P55055 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.85■□□□□ 0.93
NR1H2P55055 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
NR1H2P55055 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.84■□□□□ 0.93
NR1H2P55055 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NR1H2P55055 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NR1H2P55055 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.84■□□□□ 0.93
NR1H2P55055 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NR1H2P55055 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NR1H2P55055 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.84■□□□□ 0.93
NR1H2P55055 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NR1H2P55055 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NR1H2P55055 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
NR1H2P55055 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.83■□□□□ 0.93
NR1H2P55055 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NR1H2P55055 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
NR1H2P55055 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
NR1H2P55055 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.83■□□□□ 0.93
NR1H2P55055 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.83■□□□□ 0.93
NR1H2P55055 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
NR1H2P55055 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NR1H2P55055 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
NR1H2P55055 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.83■□□□□ 0.92
NR1H2P55055 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
NR1H2P55055 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
NR1H2P55055 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NR1H2P55055 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NR1H2P55055 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NR1H2P55055 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
NR1H2P55055 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NR1H2P55055 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NR1H2P55055 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NR1H2P55055 AL592295.1-201ENST00000400984 884 ntBASIC20.82■□□□□ 0.92
NR1H2P55055 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NR1H2P55055 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.82■□□□□ 0.92
NR1H2P55055 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.82■□□□□ 0.92
NR1H2P55055 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NR1H2P55055 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NR1H2P55055 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NR1H2P55055 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.82■□□□□ 0.92
NR1H2P55055 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
NR1H2P55055 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
NR1H2P55055 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
NR1H2P55055 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
NR1H2P55055 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NR1H2P55055 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
NR1H2P55055 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
NR1H2P55055 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.81■□□□□ 0.92
NR1H2P55055 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.81■□□□□ 0.92
NR1H2P55055 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NR1H2P55055 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NR1H2P55055 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NR1H2P55055 AC092053.2-201ENST00000640557 1818 ntBASIC20.81■□□□□ 0.92
NR1H2P55055 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.81■□□□□ 0.92
NR1H2P55055 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NR1H2P55055 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
NR1H2P55055 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NR1H2P55055 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NR1H2P55055 AC026310.3-201ENST00000625186 2373 ntBASIC20.8■□□□□ 0.92
NR1H2P55055 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NR1H2P55055 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
NR1H2P55055 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NR1H2P55055 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
NR1H2P55055 GUSBP5-201ENST00000418136 578 ntBASIC20.8■□□□□ 0.92
NR1H2P55055 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.8■□□□□ 0.92
NR1H2P55055 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.8■□□□□ 0.92
NR1H2P55055 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
NR1H2P55055 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NR1H2P55055 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NR1H2P55055 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NR1H2P55055 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
NR1H2P55055 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NR1H2P55055 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
NR1H2P55055 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NR1H2P55055 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
NR1H2P55055 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NR1H2P55055 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NR1H2P55055 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms