Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CKS2P33552 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CKS2P33552 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CKS2P33552 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC16.27■□□□□ 0.19
CKS2P33552 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
CKS2P33552 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CKS2P33552 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CKS2P33552 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CKS2P33552 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CKS2P33552 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CKS2P33552 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CKS2P33552 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CKS2P33552 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
CKS2P33552 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CKS2P33552 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CKS2P33552 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CKS2P33552 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC16.25■□□□□ 0.19
CKS2P33552 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CKS2P33552 CR559946.2-201ENST00000623684 991 ntBASIC16.25■□□□□ 0.19
CKS2P33552 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CKS2P33552 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CKS2P33552 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
CKS2P33552 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CKS2P33552 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CKS2P33552 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC16.25■□□□□ 0.19
CKS2P33552 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CKS2P33552 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
CKS2P33552 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC16.24■□□□□ 0.19
CKS2P33552 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CKS2P33552 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CKS2P33552 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.24■□□□□ 0.19
CKS2P33552 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC16.24■□□□□ 0.19
CKS2P33552 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC16.24■□□□□ 0.19
CKS2P33552 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CKS2P33552 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC16.24■□□□□ 0.19
CKS2P33552 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CKS2P33552 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CKS2P33552 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CKS2P33552 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC16.24■□□□□ 0.19
CKS2P33552 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC16.24■□□□□ 0.19
CKS2P33552 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CKS2P33552 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CKS2P33552 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.23■□□□□ 0.19
CKS2P33552 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CKS2P33552 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CKS2P33552 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CKS2P33552 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CKS2P33552 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CKS2P33552 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
CKS2P33552 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CKS2P33552 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CKS2P33552 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CKS2P33552 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CKS2P33552 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC16.23■□□□□ 0.19
CKS2P33552 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CKS2P33552 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CKS2P33552 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CKS2P33552 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CKS2P33552 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC16.23■□□□□ 0.19
CKS2P33552 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CKS2P33552 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CKS2P33552 EI24-204ENST00000527235 1625 ntTSL 5 BASIC16.23■□□□□ 0.19
CKS2P33552 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CKS2P33552 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CKS2P33552 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CKS2P33552 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CKS2P33552 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CKS2P33552 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CKS2P33552 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CKS2P33552 ALDH1A3-203ENST00000557963 1670 ntBASIC16.22■□□□□ 0.19
CKS2P33552 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CKS2P33552 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
CKS2P33552 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC16.22■□□□□ 0.19
CKS2P33552 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CKS2P33552 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CKS2P33552 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CKS2P33552 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CKS2P33552 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
CKS2P33552 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CKS2P33552 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CKS2P33552 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.22■□□□□ 0.19
CKS2P33552 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CKS2P33552 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
CKS2P33552 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CKS2P33552 PALM-208ENST00000592155 2272 ntTSL 4 BASIC16.21■□□□□ 0.19
CKS2P33552 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CKS2P33552 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CKS2P33552 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CKS2P33552 METRNL-202ENST00000570778 967 ntTSL 5 BASIC16.21■□□□□ 0.19
CKS2P33552 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CKS2P33552 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CKS2P33552 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CKS2P33552 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CKS2P33552 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CKS2P33552 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
CKS2P33552 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.18
CKS2P33552 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CKS2P33552 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CKS2P33552 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC16.2■□□□□ 0.18
CKS2P33552 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms