Protein–RNA interactions for Protein: P09486

SPARC, SPARC, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCP09486 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPARCP09486 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPARCP09486 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPARCP09486 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPARCP09486 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SPARCP09486 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SPARCP09486 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SPARCP09486 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SPARCP09486 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPARCP09486 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SPARCP09486 LINC00526-201ENST00000581067 1875 ntBASIC19.65■□□□□ 0.74
SPARCP09486 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SPARCP09486 KRT125P-201ENST00000546827 989 ntBASIC19.65■□□□□ 0.74
SPARCP09486 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.65■□□□□ 0.74
SPARCP09486 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SPARCP09486 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPARCP09486 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.65■□□□□ 0.74
SPARCP09486 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPARCP09486 ECEL1P1-201ENST00000373592 1742 ntBASIC19.65■□□□□ 0.74
SPARCP09486 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPARCP09486 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SPARCP09486 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
SPARCP09486 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SPARCP09486 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.64■□□□□ 0.74
SPARCP09486 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SPARCP09486 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SPARCP09486 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SPARCP09486 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPARCP09486 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SPARCP09486 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.64■□□□□ 0.73
SPARCP09486 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPARCP09486 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SPARCP09486 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPARCP09486 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SPARCP09486 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SPARCP09486 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SPARCP09486 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SPARCP09486 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPARCP09486 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPARCP09486 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.64■□□□□ 0.73
SPARCP09486 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.64■□□□□ 0.73
SPARCP09486 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SPARCP09486 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SPARCP09486 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPARCP09486 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.63■□□□□ 0.73
SPARCP09486 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SPARCP09486 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.63■□□□□ 0.73
SPARCP09486 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPARCP09486 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.63■□□□□ 0.73
SPARCP09486 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
SPARCP09486 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SPARCP09486 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SPARCP09486 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPARCP09486 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SPARCP09486 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SPARCP09486 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPARCP09486 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.63■□□□□ 0.73
SPARCP09486 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SPARCP09486 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.62■□□□□ 0.73
SPARCP09486 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
SPARCP09486 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SPARCP09486 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.62■□□□□ 0.73
SPARCP09486 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SPARCP09486 AC092028.1-203ENST00000608262 953 ntBASIC19.62■□□□□ 0.73
SPARCP09486 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.62■□□□□ 0.73
SPARCP09486 LINC01529-204ENST00000636474 1715 ntBASIC19.62■□□□□ 0.73
SPARCP09486 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SPARCP09486 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPARCP09486 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPARCP09486 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPARCP09486 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SPARCP09486 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPARCP09486 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPARCP09486 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SPARCP09486 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
SPARCP09486 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SPARCP09486 AC242852.2-201ENST00000615738 1807 ntBASIC19.61■□□□□ 0.73
SPARCP09486 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.61■□□□□ 0.73
SPARCP09486 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.61■□□□□ 0.73
SPARCP09486 MTDHP2-201ENST00000601468 714 ntBASIC19.61■□□□□ 0.73
SPARCP09486 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPARCP09486 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SPARCP09486 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.61■□□□□ 0.73
SPARCP09486 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPARCP09486 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPARCP09486 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPARCP09486 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.61■□□□□ 0.73
SPARCP09486 LINC00565-201ENST00000562710 2331 ntBASIC19.6■□□□□ 0.73
SPARCP09486 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SPARCP09486 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SPARCP09486 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.6■□□□□ 0.73
SPARCP09486 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SPARCP09486 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SPARCP09486 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.6■□□□□ 0.73
SPARCP09486 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SPARCP09486 RARRES2P1-201ENST00000474487 481 ntBASIC19.6■□□□□ 0.73
SPARCP09486 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.6■□□□□ 0.73
SPARCP09486 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SPARCP09486 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.6■□□□□ 0.73
SPARCP09486 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms