Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPK3AO75631 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UPK3AO75631 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.84■□□□□ 0.77
UPK3AO75631 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.84■□□□□ 0.77
UPK3AO75631 MIR4466-201ENST00000606121 54 ntBASIC19.84■□□□□ 0.77
UPK3AO75631 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPK3AO75631 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPK3AO75631 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPK3AO75631 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPK3AO75631 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPK3AO75631 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.84■□□□□ 0.77
UPK3AO75631 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
UPK3AO75631 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UPK3AO75631 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UPK3AO75631 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
UPK3AO75631 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.83■□□□□ 0.77
UPK3AO75631 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.83■□□□□ 0.77
UPK3AO75631 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
UPK3AO75631 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.83■□□□□ 0.76
UPK3AO75631 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UPK3AO75631 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.83■□□□□ 0.76
UPK3AO75631 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
UPK3AO75631 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.83■□□□□ 0.76
UPK3AO75631 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.83■□□□□ 0.76
UPK3AO75631 ECEL1P1-201ENST00000373592 1742 ntBASIC19.82■□□□□ 0.76
UPK3AO75631 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.82■□□□□ 0.76
UPK3AO75631 AC144652.1-201ENST00000609974 1624 ntBASIC19.82■□□□□ 0.76
UPK3AO75631 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UPK3AO75631 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
UPK3AO75631 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
UPK3AO75631 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
UPK3AO75631 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
UPK3AO75631 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
UPK3AO75631 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.81■□□□□ 0.76
UPK3AO75631 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
UPK3AO75631 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.81■□□□□ 0.76
UPK3AO75631 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UPK3AO75631 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UPK3AO75631 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UPK3AO75631 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
UPK3AO75631 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UPK3AO75631 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UPK3AO75631 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
UPK3AO75631 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
UPK3AO75631 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UPK3AO75631 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.8■□□□□ 0.76
UPK3AO75631 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.8■□□□□ 0.76
UPK3AO75631 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.8■□□□□ 0.76
UPK3AO75631 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
UPK3AO75631 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UPK3AO75631 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.79■□□□□ 0.76
UPK3AO75631 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UPK3AO75631 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UPK3AO75631 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.79■□□□□ 0.76
UPK3AO75631 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
UPK3AO75631 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UPK3AO75631 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
UPK3AO75631 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UPK3AO75631 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
UPK3AO75631 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
UPK3AO75631 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UPK3AO75631 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
UPK3AO75631 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
UPK3AO75631 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.78■□□□□ 0.76
UPK3AO75631 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
UPK3AO75631 SRD5A1P1-201ENST00000442297 786 ntBASIC19.78■□□□□ 0.76
UPK3AO75631 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.78■□□□□ 0.76
UPK3AO75631 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.78■□□□□ 0.76
UPK3AO75631 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
UPK3AO75631 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.78■□□□□ 0.76
UPK3AO75631 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UPK3AO75631 AL353803.4-201ENST00000565882 1934 ntBASIC19.78■□□□□ 0.76
UPK3AO75631 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UPK3AO75631 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UPK3AO75631 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.77■□□□□ 0.76
UPK3AO75631 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UPK3AO75631 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UPK3AO75631 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
UPK3AO75631 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.77■□□□□ 0.76
UPK3AO75631 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UPK3AO75631 AL136116.3-201ENST00000402907 1138 ntBASIC19.77■□□□□ 0.76
UPK3AO75631 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.77■□□□□ 0.76
UPK3AO75631 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
UPK3AO75631 AC008406.3-201ENST00000620001 1374 ntBASIC19.77■□□□□ 0.76
UPK3AO75631 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UPK3AO75631 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UPK3AO75631 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
UPK3AO75631 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
UPK3AO75631 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.76■□□□□ 0.75
UPK3AO75631 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPK3AO75631 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPK3AO75631 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPK3AO75631 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UPK3AO75631 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
UPK3AO75631 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.76■□□□□ 0.75
UPK3AO75631 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPK3AO75631 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPK3AO75631 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.76■□□□□ 0.75
UPK3AO75631 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPK3AO75631 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms