Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC26.55■■□□□ 1.84
FOXN1O15353 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC26.55■■□□□ 1.84
FOXN1O15353 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
FOXN1O15353 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
FOXN1O15353 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
FOXN1O15353 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC26.54■■□□□ 1.84
FOXN1O15353 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC26.54■■□□□ 1.84
FOXN1O15353 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC26.54■■□□□ 1.84
FOXN1O15353 AP005435.1-201ENST00000529293 1178 ntBASIC26.54■■□□□ 1.84
FOXN1O15353 KLF13-207ENST00000560473 489 ntTSL 3 BASIC26.54■■□□□ 1.84
FOXN1O15353 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC26.54■■□□□ 1.84
FOXN1O15353 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC26.54■■□□□ 1.84
FOXN1O15353 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
FOXN1O15353 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
FOXN1O15353 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
FOXN1O15353 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
FOXN1O15353 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
FOXN1O15353 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
FOXN1O15353 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC26.53■■□□□ 1.84
FOXN1O15353 TMEM202-AS1-202ENST00000565181 2325 ntBASIC26.53■■□□□ 1.84
FOXN1O15353 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
FOXN1O15353 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC26.52■■□□□ 1.84
FOXN1O15353 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
FOXN1O15353 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
FOXN1O15353 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC26.52■■□□□ 1.84
FOXN1O15353 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
FOXN1O15353 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
FOXN1O15353 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC26.52■■□□□ 1.84
FOXN1O15353 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
FOXN1O15353 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
FOXN1O15353 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
FOXN1O15353 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
FOXN1O15353 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC26.51■■□□□ 1.84
FOXN1O15353 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
FOXN1O15353 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC26.51■■□□□ 1.83
FOXN1O15353 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
FOXN1O15353 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC26.51■■□□□ 1.83
FOXN1O15353 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC26.51■■□□□ 1.83
FOXN1O15353 GALNS-213ENST00000569433 723 ntTSL 3 BASIC26.51■■□□□ 1.83
FOXN1O15353 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
FOXN1O15353 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC26.51■■□□□ 1.83
FOXN1O15353 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
FOXN1O15353 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC26.5■■□□□ 1.83
FOXN1O15353 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
FOXN1O15353 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC26.5■■□□□ 1.83
FOXN1O15353 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
FOXN1O15353 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
FOXN1O15353 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
FOXN1O15353 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
FOXN1O15353 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC26.5■■□□□ 1.83
FOXN1O15353 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
FOXN1O15353 EED-207ENST00000528180 1745 ntTSL 5 BASIC26.5■■□□□ 1.83
FOXN1O15353 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
FOXN1O15353 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
FOXN1O15353 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
FOXN1O15353 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC26.49■■□□□ 1.83
FOXN1O15353 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
FOXN1O15353 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
FOXN1O15353 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
FOXN1O15353 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC26.48■■□□□ 1.83
FOXN1O15353 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
FOXN1O15353 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC26.48■■□□□ 1.83
FOXN1O15353 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.48■■□□□ 1.83
FOXN1O15353 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
FOXN1O15353 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC26.48■■□□□ 1.83
FOXN1O15353 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC26.47■■□□□ 1.83
FOXN1O15353 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC26.47■■□□□ 1.83
FOXN1O15353 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
FOXN1O15353 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
FOXN1O15353 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC26.47■■□□□ 1.83
FOXN1O15353 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC26.47■■□□□ 1.83
FOXN1O15353 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC26.47■■□□□ 1.83
FOXN1O15353 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC26.47■■□□□ 1.83
FOXN1O15353 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.47■■□□□ 1.83
FOXN1O15353 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC26.46■■□□□ 1.83
FOXN1O15353 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
FOXN1O15353 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
FOXN1O15353 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
FOXN1O15353 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
FOXN1O15353 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
FOXN1O15353 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC26.46■■□□□ 1.83
FOXN1O15353 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
FOXN1O15353 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
FOXN1O15353 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC26.45■■□□□ 1.82
FOXN1O15353 METTL26-203ENST00000397664 604 ntTSL 2 BASIC26.45■■□□□ 1.82
FOXN1O15353 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.82
FOXN1O15353 WWOX-218ENST00000627394 894 ntTSL 5 BASIC26.45■■□□□ 1.82
FOXN1O15353 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC26.45■■□□□ 1.82
FOXN1O15353 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC26.45■■□□□ 1.82
FOXN1O15353 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
FOXN1O15353 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
FOXN1O15353 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC26.44■■□□□ 1.82
FOXN1O15353 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
FOXN1O15353 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
FOXN1O15353 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC26.44■■□□□ 1.82
FOXN1O15353 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
FOXN1O15353 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
FOXN1O15353 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
FOXN1O15353 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
FOXN1O15353 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms