Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.01■□□□□ 0.79
SURF4O15260 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.01■□□□□ 0.79
SURF4O15260 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SURF4O15260 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SURF4O15260 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SURF4O15260 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.01■□□□□ 0.79
SURF4O15260 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SURF4O15260 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SURF4O15260 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20■□□□□ 0.79
SURF4O15260 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20■□□□□ 0.79
SURF4O15260 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SURF4O15260 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20■□□□□ 0.79
SURF4O15260 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20■□□□□ 0.79
SURF4O15260 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SURF4O15260 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20■□□□□ 0.79
SURF4O15260 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SURF4O15260 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20■□□□□ 0.79
SURF4O15260 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SURF4O15260 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SURF4O15260 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SURF4O15260 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SURF4O15260 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.99■□□□□ 0.79
SURF4O15260 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SURF4O15260 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SURF4O15260 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SURF4O15260 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SURF4O15260 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.99■□□□□ 0.79
SURF4O15260 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SURF4O15260 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SURF4O15260 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SURF4O15260 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.98■□□□□ 0.79
SURF4O15260 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SURF4O15260 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SURF4O15260 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.98■□□□□ 0.79
SURF4O15260 RARRES2P1-201ENST00000474487 481 ntBASIC19.98■□□□□ 0.79
SURF4O15260 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SURF4O15260 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SURF4O15260 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.98■□□□□ 0.79
SURF4O15260 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SURF4O15260 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SURF4O15260 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
SURF4O15260 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.97■□□□□ 0.79
SURF4O15260 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SURF4O15260 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SURF4O15260 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.97■□□□□ 0.79
SURF4O15260 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.97■□□□□ 0.79
SURF4O15260 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SURF4O15260 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SURF4O15260 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SURF4O15260 AC103834.1-201ENST00000520383 144 ntBASIC19.97■□□□□ 0.79
SURF4O15260 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.97■□□□□ 0.79
SURF4O15260 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SURF4O15260 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SURF4O15260 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SURF4O15260 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SURF4O15260 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SURF4O15260 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.96■□□□□ 0.79
SURF4O15260 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
SURF4O15260 SNX5-217ENST00000606557 1087 ntBASIC19.96■□□□□ 0.79
SURF4O15260 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.96■□□□□ 0.79
SURF4O15260 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.96■□□□□ 0.79
SURF4O15260 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SURF4O15260 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SURF4O15260 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SURF4O15260 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SURF4O15260 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.95■□□□□ 0.78
SURF4O15260 AL031848.2-201ENST00000607670 837 ntBASIC19.95■□□□□ 0.78
SURF4O15260 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
SURF4O15260 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SURF4O15260 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SURF4O15260 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SURF4O15260 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SURF4O15260 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SURF4O15260 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SURF4O15260 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SURF4O15260 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SURF4O15260 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SURF4O15260 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SURF4O15260 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.94■□□□□ 0.78
SURF4O15260 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.94■□□□□ 0.78
SURF4O15260 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.94■□□□□ 0.78
SURF4O15260 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SURF4O15260 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SURF4O15260 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SURF4O15260 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SURF4O15260 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.93■□□□□ 0.78
SURF4O15260 AC103724.3-201ENST00000564481 992 ntBASIC19.93■□□□□ 0.78
SURF4O15260 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SURF4O15260 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SURF4O15260 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SURF4O15260 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SURF4O15260 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
SURF4O15260 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SURF4O15260 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SURF4O15260 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SURF4O15260 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SURF4O15260 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SURF4O15260 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SURF4O15260 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.91■□□□□ 0.78
SURF4O15260 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms