Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV21A0A0B4J279 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV21A0A0B4J279 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV21A0A0B4J279 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
TRAV21A0A0B4J279 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV21A0A0B4J279 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAV21A0A0B4J279 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV21A0A0B4J279 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TRAV21A0A0B4J279 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV21A0A0B4J279 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV21A0A0B4J279 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV21A0A0B4J279 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAV21A0A0B4J279 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAV21A0A0B4J279 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRAV21A0A0B4J279 AC137767.1-201ENST00000602918 1920 ntBASIC16.44■□□□□ 0.22
TRAV21A0A0B4J279 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
TRAV21A0A0B4J279 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TRAV21A0A0B4J279 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV21A0A0B4J279 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV21A0A0B4J279 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV21A0A0B4J279 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRAV21A0A0B4J279 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAV21A0A0B4J279 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC16.43■□□□□ 0.22
TRAV21A0A0B4J279 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TRAV21A0A0B4J279 MIR4508-201ENST00000584178 70 ntBASIC16.43■□□□□ 0.22
TRAV21A0A0B4J279 AC144652.1-201ENST00000609974 1624 ntBASIC16.43■□□□□ 0.22
TRAV21A0A0B4J279 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV21A0A0B4J279 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC16.43■□□□□ 0.22
TRAV21A0A0B4J279 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV21A0A0B4J279 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV21A0A0B4J279 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAV21A0A0B4J279 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV21A0A0B4J279 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV21A0A0B4J279 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV21A0A0B4J279 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV21A0A0B4J279 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV21A0A0B4J279 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TRAV21A0A0B4J279 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV21A0A0B4J279 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV21A0A0B4J279 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV21A0A0B4J279 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAV21A0A0B4J279 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV21A0A0B4J279 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TRAV21A0A0B4J279 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV21A0A0B4J279 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TRAV21A0A0B4J279 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAV21A0A0B4J279 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TRAV21A0A0B4J279 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV21A0A0B4J279 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV21A0A0B4J279 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV21A0A0B4J279 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAV21A0A0B4J279 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV21A0A0B4J279 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC16.41■□□□□ 0.22
TRAV21A0A0B4J279 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV21A0A0B4J279 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV21A0A0B4J279 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV21A0A0B4J279 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV21A0A0B4J279 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV21A0A0B4J279 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV21A0A0B4J279 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV21A0A0B4J279 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAV21A0A0B4J279 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV21A0A0B4J279 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV21A0A0B4J279 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV21A0A0B4J279 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV21A0A0B4J279 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAV21A0A0B4J279 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV21A0A0B4J279 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV21A0A0B4J279 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAV21A0A0B4J279 SNX5-217ENST00000606557 1087 ntBASIC16.4■□□□□ 0.22
TRAV21A0A0B4J279 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
TRAV21A0A0B4J279 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV21A0A0B4J279 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV21A0A0B4J279 AC092053.2-201ENST00000640557 1818 ntBASIC16.4■□□□□ 0.22
TRAV21A0A0B4J279 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV21A0A0B4J279 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
TRAV21A0A0B4J279 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.22
TRAV21A0A0B4J279 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRAV21A0A0B4J279 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRAV21A0A0B4J279 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV21A0A0B4J279 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV21A0A0B4J279 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV21A0A0B4J279 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TRAV21A0A0B4J279 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV21A0A0B4J279 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV21A0A0B4J279 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV21A0A0B4J279 GUK1-208ENST00000366728 842 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV21A0A0B4J279 TK2-202ENST00000417693 1046 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV21A0A0B4J279 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
TRAV21A0A0B4J279 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TRAV21A0A0B4J279 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV21A0A0B4J279 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV21A0A0B4J279 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAV21A0A0B4J279 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAV21A0A0B4J279 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV21A0A0B4J279 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV21A0A0B4J279 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV21A0A0B4J279 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV21A0A0B4J279 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
TRAV21A0A0B4J279 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms