Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 MIR6869-201ENST00000619434 62 ntBASIC12□□□□□ -0.49
APOC1P02654 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC12□□□□□ -0.49
APOC1P02654 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC12□□□□□ -0.49
APOC1P02654 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC12□□□□□ -0.49
APOC1P02654 TRAF3-201ENST00000347662 7700 ntTSL 5 BASIC12□□□□□ -0.49
APOC1P02654 AC008132.1-202ENST00000342005 1389 ntBASIC12□□□□□ -0.49
APOC1P02654 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC12□□□□□ -0.49
APOC1P02654 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
APOC1P02654 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC12□□□□□ -0.49
APOC1P02654 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
APOC1P02654 LINC00567-201ENST00000569854 3409 ntBASIC12□□□□□ -0.49
APOC1P02654 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
APOC1P02654 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
APOC1P02654 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC12□□□□□ -0.49
APOC1P02654 RNF150-206ENST00000515673 9805 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
APOC1P02654 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
APOC1P02654 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
APOC1P02654 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
APOC1P02654 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
APOC1P02654 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC12□□□□□ -0.49
APOC1P02654 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
APOC1P02654 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12□□□□□ -0.49
APOC1P02654 HERC2P9-206ENST00000529624 5187 ntBASIC12□□□□□ -0.49
APOC1P02654 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC12□□□□□ -0.49
APOC1P02654 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC12□□□□□ -0.49
APOC1P02654 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
APOC1P02654 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
APOC1P02654 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOC1P02654 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
APOC1P02654 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
APOC1P02654 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC11.99□□□□□ -0.49
APOC1P02654 NOS3-203ENST00000461406 3644 ntTSL 2 BASIC11.99□□□□□ -0.49
APOC1P02654 ATAD5-201ENST00000321990 6869 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOC1P02654 CPT1A-205ENST00000539743 2382 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
APOC1P02654 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
APOC1P02654 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
APOC1P02654 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
APOC1P02654 AMBRA1-212ENST00000534300 5067 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
APOC1P02654 GPD1-201ENST00000301149 3082 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOC1P02654 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC11.99□□□□□ -0.49
APOC1P02654 ARHGEF10-205ENST00000518288 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOC1P02654 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOC1P02654 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOC1P02654 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
APOC1P02654 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
APOC1P02654 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
APOC1P02654 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC11.99□□□□□ -0.49
APOC1P02654 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC11.99□□□□□ -0.49
APOC1P02654 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC11.99□□□□□ -0.49
APOC1P02654 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC11.99□□□□□ -0.49
APOC1P02654 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC11.99□□□□□ -0.49
APOC1P02654 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC11.99□□□□□ -0.49
APOC1P02654 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
APOC1P02654 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC11.99□□□□□ -0.49
APOC1P02654 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC11.99□□□□□ -0.49
APOC1P02654 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC11.99□□□□□ -0.49
APOC1P02654 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
APOC1P02654 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
APOC1P02654 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
APOC1P02654 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC11.99□□□□□ -0.49
APOC1P02654 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC11.99□□□□□ -0.49
APOC1P02654 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC11.99□□□□□ -0.49
APOC1P02654 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOC1P02654 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOC1P02654 AL022238.4-201ENST00000639722 4563 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
APOC1P02654 CAMSAP1-202ENST00000389532 7696 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
APOC1P02654 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOC1P02654 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC11.99□□□□□ -0.49
APOC1P02654 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOC1P02654 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOC1P02654 DDC-212ENST00000615193 1674 ntTSL 3 BASIC11.99□□□□□ -0.49
APOC1P02654 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOC1P02654 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC11.99□□□□□ -0.49
APOC1P02654 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC11.99□□□□□ -0.49
APOC1P02654 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC11.99□□□□□ -0.49
APOC1P02654 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC11.99□□□□□ -0.49
APOC1P02654 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC11.99□□□□□ -0.49
APOC1P02654 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOC1P02654 GRM4-206ENST00000544773 2983 ntTSL 2 BASIC11.99□□□□□ -0.49
APOC1P02654 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
APOC1P02654 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOC1P02654 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOC1P02654 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOC1P02654 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOC1P02654 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOC1P02654 SMCR8-201ENST00000406438 8279 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOC1P02654 ATP8A1-202ENST00000381668 8270 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
APOC1P02654 ADAM19-201ENST00000257527 6481 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC1P02654 CCDC144A-204ENST00000360524 5830 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC1P02654 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC1P02654 TMEM136-202ENST00000375095 4143 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
APOC1P02654 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC1P02654 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
APOC1P02654 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC1P02654 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
APOC1P02654 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC1P02654 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC11.98□□□□□ -0.49
APOC1P02654 CACNA1F-201ENST00000323022 6037 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
APOC1P02654 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC11.98□□□□□ -0.49
APOC1P02654 C2-209ENST00000452323 1999 ntTSL 2 BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms