Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 PPP1R26P2-201ENST00000611403 3595 ntBASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 AL357140.3-201ENST00000639753 1983 ntBASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
HLA-DRB4X5D2U9 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 BCYRN1-201ENST00000418539 200 ntBASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 NDUFS6P1-201ENST00000485187 316 ntBASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 ORAOV1P1-201ENST00000503108 395 ntBASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 POLD4-208ENST00000532830 904 ntTSL 3 BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 KRT8P2-201ENST00000556193 944 ntBASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 SNORD3B-1-201ENST00000577988 758 ntBASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 GAS7-216ENST00000583882 553 ntTSL 5 BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 MIR4522-201ENST00000584932 87 ntBASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 AC005632.3-201ENST00000605544 308 ntBASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 AC051619.9-201ENST00000623237 597 ntBASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 CMC2-224ENST00000630396 481 ntTSL 5 BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 STX3-207ENST00000633708 3111 ntTSL 5 BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC10.22□□□□□ -0.77
HLA-DRB4X5D2U9 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 PCDHB19P-202ENST00000625133 2914 ntBASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms