Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
GAPDHP04406 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
GAPDHP04406 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC11.34□□□□□ -0.59
GAPDHP04406 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
GAPDHP04406 TEX35-203ENST00000367641 2377 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
GAPDHP04406 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
GAPDHP04406 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
GAPDHP04406 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
GAPDHP04406 CLTCL1-210ENST00000617926 1695 ntTSL 2 BASIC11.34□□□□□ -0.59
GAPDHP04406 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
GAPDHP04406 TBC1D27-202ENST00000424239 1573 ntBASIC11.34□□□□□ -0.59
GAPDHP04406 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
GAPDHP04406 LGALS3BP-201ENST00000262776 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
GAPDHP04406 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
GAPDHP04406 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
GAPDHP04406 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC11.34□□□□□ -0.59
GAPDHP04406 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
GAPDHP04406 LNP1-201ENST00000383693 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
GAPDHP04406 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
GAPDHP04406 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
GAPDHP04406 AL583805.1-201ENST00000391389 531 ntBASIC11.34□□□□□ -0.59
GAPDHP04406 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
GAPDHP04406 TUBB2BP1-201ENST00000404155 871 ntBASIC11.34□□□□□ -0.59
GAPDHP04406 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC11.34□□□□□ -0.59
GAPDHP04406 PPP1R2P4-201ENST00000424051 595 ntBASIC11.34□□□□□ -0.59
GAPDHP04406 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
GAPDHP04406 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
GAPDHP04406 NUP210P1-202ENST00000504322 710 ntBASIC11.34□□□□□ -0.59
GAPDHP04406 COQ10BP2-201ENST00000513804 724 ntBASIC11.34□□□□□ -0.59
GAPDHP04406 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC11.34□□□□□ -0.59
GAPDHP04406 NEU3-202ENST00000526068 431 ntTSL 2 BASIC11.34□□□□□ -0.59
GAPDHP04406 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
GAPDHP04406 RTN3P1-201ENST00000536295 711 ntBASIC11.34□□□□□ -0.59
GAPDHP04406 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC11.34□□□□□ -0.59
GAPDHP04406 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
GAPDHP04406 AC145285.5-201ENST00000562217 361 ntBASIC11.34□□□□□ -0.59
GAPDHP04406 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC11.34□□□□□ -0.59
GAPDHP04406 MIR4754-201ENST00000582477 89 ntBASIC11.34□□□□□ -0.59
GAPDHP04406 CENPX-208ENST00000584347 799 ntTSL 2 BASIC11.34□□□□□ -0.59
GAPDHP04406 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC11.34□□□□□ -0.59
GAPDHP04406 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC11.34□□□□□ -0.59
GAPDHP04406 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC11.34□□□□□ -0.59
GAPDHP04406 AC007326.1-201ENST00000604539 458 ntBASIC11.34□□□□□ -0.59
GAPDHP04406 AL353770.1-201ENST00000614915 403 ntBASIC11.34□□□□□ -0.59
GAPDHP04406 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC11.34□□□□□ -0.59
GAPDHP04406 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC11.34□□□□□ -0.59
GAPDHP04406 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
GAPDHP04406 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
GAPDHP04406 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
GAPDHP04406 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC11.34□□□□□ -0.59
GAPDHP04406 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
GAPDHP04406 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
GAPDHP04406 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
GAPDHP04406 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
GAPDHP04406 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
GAPDHP04406 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC11.34□□□□□ -0.59
GAPDHP04406 FILIP1L-203ENST00000383694 3280 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
GAPDHP04406 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC11.34□□□□□ -0.59
GAPDHP04406 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
GAPDHP04406 LINC01209-201ENST00000451289 2400 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
GAPDHP04406 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
GAPDHP04406 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC11.34□□□□□ -0.59
GAPDHP04406 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC11.33□□□□□ -0.6
GAPDHP04406 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
GAPDHP04406 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
GAPDHP04406 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
GAPDHP04406 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC11.33□□□□□ -0.6
GAPDHP04406 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
GAPDHP04406 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC11.33□□□□□ -0.6
GAPDHP04406 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
GAPDHP04406 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC11.33□□□□□ -0.6
GAPDHP04406 GRK7-201ENST00000264952 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
GAPDHP04406 PRAME-203ENST00000402697 2057 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
GAPDHP04406 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC11.33□□□□□ -0.6
GAPDHP04406 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
GAPDHP04406 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
GAPDHP04406 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC11.33□□□□□ -0.6
GAPDHP04406 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
GAPDHP04406 AL662890.1-201ENST00000396818 632 ntBASIC11.33□□□□□ -0.6
GAPDHP04406 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
GAPDHP04406 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
GAPDHP04406 AL592076.1-201ENST00000424448 303 ntBASIC11.33□□□□□ -0.6
GAPDHP04406 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC11.33□□□□□ -0.6
GAPDHP04406 AC098934.1-203ENST00000442868 1262 ntBASIC11.33□□□□□ -0.6
GAPDHP04406 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC11.33□□□□□ -0.6
GAPDHP04406 RPL18AP8-201ENST00000486071 528 ntBASIC11.33□□□□□ -0.6
GAPDHP04406 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC11.33□□□□□ -0.6
GAPDHP04406 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC11.33□□□□□ -0.6
GAPDHP04406 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
GAPDHP04406 RN7SL665P-201ENST00000578793 300 ntBASIC11.33□□□□□ -0.6
GAPDHP04406 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
GAPDHP04406 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
GAPDHP04406 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
GAPDHP04406 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
GAPDHP04406 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
GAPDHP04406 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
GAPDHP04406 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC11.33□□□□□ -0.6
GAPDHP04406 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
GAPDHP04406 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
GAPDHP04406 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms