Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
ZIC3O60481 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZIC3O60481 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZIC3O60481 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.06□□□□□ -0.48
ZIC3O60481 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
ZIC3O60481 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
ZIC3O60481 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.06□□□□□ -0.48
ZIC3O60481 AC010970.1-201ENST00000445125 1848 ntBASIC12.06□□□□□ -0.48
ZIC3O60481 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ZIC3O60481 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ZIC3O60481 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ZIC3O60481 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZIC3O60481 STT3A-211ENST00000529196 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZIC3O60481 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
ZIC3O60481 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZIC3O60481 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ZIC3O60481 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ZIC3O60481 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
ZIC3O60481 LINC00567-201ENST00000569854 3409 ntBASIC12.05□□□□□ -0.48
ZIC3O60481 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
ZIC3O60481 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
ZIC3O60481 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ZIC3O60481 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ZIC3O60481 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ZIC3O60481 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC12.05□□□□□ -0.48
ZIC3O60481 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ZIC3O60481 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
ZIC3O60481 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.05□□□□□ -0.48
ZIC3O60481 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ZIC3O60481 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
ZIC3O60481 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.05□□□□□ -0.48
ZIC3O60481 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ZIC3O60481 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ZIC3O60481 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
ZIC3O60481 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ZIC3O60481 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC12.05□□□□□ -0.48
ZIC3O60481 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ZIC3O60481 HNRNPA1P21-201ENST00000424115 961 ntBASIC12.05□□□□□ -0.48
ZIC3O60481 AL136084.1-201ENST00000449172 318 ntBASIC12.05□□□□□ -0.48
ZIC3O60481 RPL35P1-201ENST00000450819 370 ntBASIC12.05□□□□□ -0.48
ZIC3O60481 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC12.05□□□□□ -0.48
ZIC3O60481 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC12.05□□□□□ -0.48
ZIC3O60481 DNM1P51-201ENST00000558149 522 ntBASIC12.05□□□□□ -0.48
ZIC3O60481 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC12.05□□□□□ -0.48
ZIC3O60481 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC12.05□□□□□ -0.48
ZIC3O60481 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC12.05□□□□□ -0.48
ZIC3O60481 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC12.05□□□□□ -0.48
ZIC3O60481 LAMP2-201ENST00000200639 1867 ntAPPRIS P5 TSL 1 (best) BASIC12.05□□□□□ -0.48
ZIC3O60481 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
ZIC3O60481 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ZIC3O60481 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ZIC3O60481 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ZIC3O60481 NUP85-201ENST00000245544 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ZIC3O60481 SFTPA1-203ENST00000428376 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ZIC3O60481 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC12.05□□□□□ -0.48
ZIC3O60481 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC12.05□□□□□ -0.48
ZIC3O60481 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ZIC3O60481 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
ZIC3O60481 DMBT1P1-203ENST00000636837 4628 ntBASIC12.05□□□□□ -0.48
ZIC3O60481 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ZIC3O60481 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ZIC3O60481 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ZIC3O60481 CDC45-201ENST00000263201 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ZIC3O60481 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
ZIC3O60481 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
ZIC3O60481 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.05□□□□□ -0.48
ZIC3O60481 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.05□□□□□ -0.48
ZIC3O60481 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
ZIC3O60481 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ZIC3O60481 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.05□□□□□ -0.48
ZIC3O60481 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.04□□□□□ -0.48
ZIC3O60481 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZIC3O60481 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZIC3O60481 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZIC3O60481 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
ZIC3O60481 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC12.04□□□□□ -0.48
ZIC3O60481 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ZIC3O60481 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ZIC3O60481 AL450468.2-201ENST00000565955 1889 ntBASIC12.04□□□□□ -0.48
ZIC3O60481 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ZIC3O60481 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ZIC3O60481 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZIC3O60481 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZIC3O60481 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZIC3O60481 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
ZIC3O60481 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ZIC3O60481 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC12.04□□□□□ -0.48
ZIC3O60481 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC12.04□□□□□ -0.48
ZIC3O60481 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZIC3O60481 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZIC3O60481 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZIC3O60481 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC12.04□□□□□ -0.48
ZIC3O60481 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
ZIC3O60481 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZIC3O60481 PARP8-206ENST00000503665 572 ntTSL 4 BASIC12.04□□□□□ -0.48
ZIC3O60481 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC12.04□□□□□ -0.48
ZIC3O60481 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC12.04□□□□□ -0.48
ZIC3O60481 OR4A49P-201ENST00000527050 632 ntBASIC12.04□□□□□ -0.48
ZIC3O60481 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC12.04□□□□□ -0.48
ZIC3O60481 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms