Protein–RNA interactions for Protein: P30260

CDC27, Cell division cycle protein 27 homolog, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27P30260 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDC27P30260 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDC27P30260 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC15.56■□□□□ 0.08
CDC27P30260 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC15.56■□□□□ 0.08
CDC27P30260 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC15.56■□□□□ 0.08
CDC27P30260 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDC27P30260 MGLL-202ENST00000398101 1414 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDC27P30260 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CDC27P30260 ZNF772-203ENST00000425074 1601 ntTSL 2 BASIC15.56■□□□□ 0.08
CDC27P30260 USP36-202ENST00000449938 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDC27P30260 AL157832.2-205ENST00000597245 1649 ntBASIC15.56■□□□□ 0.08
CDC27P30260 AS3MT-202ENST00000615257 1723 ntTSL 5 BASIC15.56■□□□□ 0.08
CDC27P30260 HACD3-210ENST00000568793 1824 ntTSL 5 BASIC15.56■□□□□ 0.08
CDC27P30260 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC15.56■□□□□ 0.08
CDC27P30260 AL356130.1-201ENST00000620188 1965 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDC27P30260 AL031432.4-201ENST00000641729 2190 ntBASIC15.56■□□□□ 0.08
CDC27P30260 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDC27P30260 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC15.56■□□□□ 0.08
CDC27P30260 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDC27P30260 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDC27P30260 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CDC27P30260 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDC27P30260 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CDC27P30260 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC15.56■□□□□ 0.08
CDC27P30260 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDC27P30260 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDC27P30260 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC27P30260 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC15.55■□□□□ 0.08
CDC27P30260 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CDC27P30260 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
CDC27P30260 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC15.55■□□□□ 0.08
CDC27P30260 RHOH-219ENST00000614836 2114 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
CDC27P30260 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC27P30260 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC27P30260 TRMT10B-203ENST00000377754 1881 ntTSL 2 BASIC15.55■□□□□ 0.08
CDC27P30260 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC27P30260 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC27P30260 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDC27P30260 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC27P30260 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC27P30260 AC022080.1-201ENST00000366255 781 ntBASIC15.55■□□□□ 0.08
CDC27P30260 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
CDC27P30260 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CDC27P30260 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC15.55■□□□□ 0.08
CDC27P30260 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC27P30260 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC15.55■□□□□ 0.08
CDC27P30260 PIN4P1-201ENST00000451079 396 ntBASIC15.55■□□□□ 0.08
CDC27P30260 AC093909.3-201ENST00000504783 336 ntBASIC15.55■□□□□ 0.08
CDC27P30260 MYOZ3-205ENST00000520112 605 ntTSL 4 BASIC15.55■□□□□ 0.08
CDC27P30260 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC27P30260 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDC27P30260 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC15.55■□□□□ 0.08
CDC27P30260 AC008972.2-201ENST00000606587 494 ntBASIC15.55■□□□□ 0.08
CDC27P30260 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC15.55■□□□□ 0.08
CDC27P30260 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC15.55■□□□□ 0.08
CDC27P30260 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC15.55■□□□□ 0.08
CDC27P30260 AL645937.6-201ENST00000641122 3727 ntBASIC15.55■□□□□ 0.08
CDC27P30260 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDC27P30260 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC27P30260 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC27P30260 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC27P30260 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC27P30260 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CDC27P30260 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC27P30260 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC15.55■□□□□ 0.08
CDC27P30260 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CDC27P30260 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC27P30260 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDC27P30260 DDC-206ENST00000431062 1620 ntTSL 5 BASIC15.54■□□□□ 0.08
CDC27P30260 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDC27P30260 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDC27P30260 AL021155.1-201ENST00000438808 2637 ntBASIC15.54■□□□□ 0.08
CDC27P30260 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC15.54■□□□□ 0.08
CDC27P30260 PICART1-201ENST00000499842 2533 ntTSL 2 BASIC15.54■□□□□ 0.08
CDC27P30260 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDC27P30260 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC15.54■□□□□ 0.08
CDC27P30260 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDC27P30260 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CDC27P30260 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDC27P30260 OS9-206ENST00000435406 2346 ntTSL 2 BASIC15.54■□□□□ 0.08
CDC27P30260 AC034205.3-201ENST00000603595 1376 ntBASIC15.54■□□□□ 0.08
CDC27P30260 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC15.54■□□□□ 0.08
CDC27P30260 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC15.54■□□□□ 0.08
CDC27P30260 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDC27P30260 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDC27P30260 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.54■□□□□ 0.08
CDC27P30260 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CDC27P30260 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CDC27P30260 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC15.54■□□□□ 0.08
CDC27P30260 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC15.54■□□□□ 0.08
CDC27P30260 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC15.54■□□□□ 0.08
CDC27P30260 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDC27P30260 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDC27P30260 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDC27P30260 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC15.54■□□□□ 0.08
CDC27P30260 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC15.54■□□□□ 0.08
CDC27P30260 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDC27P30260 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC15.54■□□□□ 0.08
CDC27P30260 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC15.54■□□□□ 0.08
CDC27P30260 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms