Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
O00370 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
O00370 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC14.38□□□□□ -0.11
O00370 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
O00370 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
O00370 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC14.38□□□□□ -0.11
O00370 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
O00370 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
O00370 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
O00370 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC14.38□□□□□ -0.11
O00370 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
O00370 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
O00370 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC14.38□□□□□ -0.11
O00370 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
O00370 AC108734.2-201ENST00000420887 1069 ntBASIC14.38□□□□□ -0.11
O00370 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC14.38□□□□□ -0.11
O00370 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC14.38□□□□□ -0.11
O00370 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
O00370 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC14.38□□□□□ -0.11
O00370 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC14.38□□□□□ -0.11
O00370 CES1P2-201ENST00000566467 1242 ntBASIC14.38□□□□□ -0.11
O00370 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
O00370 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC14.38□□□□□ -0.11
O00370 SPCS2P2-201ENST00000603270 608 ntBASIC14.38□□□□□ -0.11
O00370 AL136982.5-201ENST00000605222 294 ntBASIC14.38□□□□□ -0.11
O00370 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
O00370 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
O00370 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
O00370 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
O00370 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
O00370 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
O00370 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC14.38□□□□□ -0.11
O00370 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
O00370 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
O00370 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
O00370 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC14.38□□□□□ -0.11
O00370 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
O00370 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
O00370 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
O00370 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
O00370 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
O00370 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
O00370 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
O00370 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
O00370 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
O00370 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
O00370 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC14.37□□□□□ -0.11
O00370 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
O00370 AL357563.1-201ENST00000404728 395 ntBASIC14.37□□□□□ -0.11
O00370 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
O00370 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
O00370 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC14.37□□□□□ -0.11
O00370 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC14.37□□□□□ -0.11
O00370 RN7SL8P-201ENST00000461771 266 ntBASIC14.37□□□□□ -0.11
O00370 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC14.37□□□□□ -0.11
O00370 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
O00370 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
O00370 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
O00370 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
O00370 MIR4722-201ENST00000578292 60 ntBASIC14.37□□□□□ -0.11
O00370 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
O00370 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
O00370 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
O00370 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
O00370 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
O00370 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
O00370 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
O00370 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
O00370 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
O00370 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
O00370 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
O00370 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC14.37□□□□□ -0.11
O00370 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
O00370 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
O00370 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
O00370 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
O00370 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
O00370 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
O00370 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC14.36□□□□□ -0.11
O00370 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
O00370 AC021305.1-201ENST00000520656 1514 ntBASIC14.36□□□□□ -0.11
O00370 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
O00370 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
O00370 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC14.36□□□□□ -0.11
O00370 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
O00370 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC14.36□□□□□ -0.11
O00370 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
O00370 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC14.36□□□□□ -0.11
O00370 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
O00370 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
O00370 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC14.36□□□□□ -0.11
O00370 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
O00370 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
O00370 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
O00370 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
O00370 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC14.36□□□□□ -0.11
O00370 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
O00370 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
O00370 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC14.36□□□□□ -0.11
O00370 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms