Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 AC004834.1-202ENST00000638785 1737 ntTSL 5 BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 DKKL1P1-201ENST00000400550 698 ntBASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 GGTLC4P-201ENST00000402176 664 ntBASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 OR2W2P-201ENST00000406313 909 ntBASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 RPL3P2-204ENST00000413027 1203 ntBASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 NME6-203ENST00000415644 849 ntTSL 2 BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 CEP164P1-201ENST00000455142 418 ntBASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 AC095040.1-201ENST00000513286 675 ntBASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 NAA40-205ENST00000539656 577 ntTSL 4 BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 AC097724.1-201ENST00000609581 426 ntBASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 AC007718.1-201ENST00000621078 280 ntBASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 AC019109.1-201ENST00000401725 1874 ntBASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 PCDHA6-201ENST00000378126 3267 ntBASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 AC010336.1-201ENST00000539278 4739 ntBASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 POM121L4P-202ENST00000427789 1891 ntBASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
HLA-DRB4X5D2U9 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms