Protein–RNA interactions for Protein: P13796

LCP1, Plastin-2, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCP1P13796 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC14.22□□□□□ -0.13
LCP1P13796 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
LCP1P13796 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC14.22□□□□□ -0.13
LCP1P13796 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LCP1P13796 GALP-202ENST00000440823 889 ntTSL 5 BASIC14.22□□□□□ -0.13
LCP1P13796 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC14.22□□□□□ -0.13
LCP1P13796 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC14.22□□□□□ -0.13
LCP1P13796 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC14.22□□□□□ -0.13
LCP1P13796 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC14.22□□□□□ -0.13
LCP1P13796 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC14.22□□□□□ -0.13
LCP1P13796 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LCP1P13796 MIR5196-201ENST00000578146 115 ntBASIC14.22□□□□□ -0.13
LCP1P13796 AC005777.1-201ENST00000588332 187 ntBASIC14.22□□□□□ -0.13
LCP1P13796 AC126755.5-201ENST00000622756 267 ntBASIC14.22□□□□□ -0.13
LCP1P13796 SNX1-214ENST00000625244 324 ntTSL 5 BASIC14.22□□□□□ -0.13
LCP1P13796 RETN-203ENST00000629642 400 ntTSL 5 BASIC14.22□□□□□ -0.13
LCP1P13796 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.22□□□□□ -0.13
LCP1P13796 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.22□□□□□ -0.13
LCP1P13796 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC14.22□□□□□ -0.13
LCP1P13796 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LCP1P13796 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LCP1P13796 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LCP1P13796 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC14.22□□□□□ -0.13
LCP1P13796 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LCP1P13796 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC14.22□□□□□ -0.13
LCP1P13796 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC14.22□□□□□ -0.13
LCP1P13796 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LCP1P13796 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
LCP1P13796 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LCP1P13796 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LCP1P13796 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LCP1P13796 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
LCP1P13796 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LCP1P13796 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LCP1P13796 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC14.22□□□□□ -0.13
LCP1P13796 AC107918.4-201ENST00000641966 3141 ntBASIC14.21□□□□□ -0.13
LCP1P13796 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC14.21□□□□□ -0.13
LCP1P13796 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LCP1P13796 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LCP1P13796 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LCP1P13796 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LCP1P13796 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC14.21□□□□□ -0.13
LCP1P13796 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LCP1P13796 AC091807.1-201ENST00000418838 1544 ntBASIC14.21□□□□□ -0.13
LCP1P13796 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC14.21□□□□□ -0.13
LCP1P13796 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LCP1P13796 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC14.21□□□□□ -0.13
LCP1P13796 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
LCP1P13796 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LCP1P13796 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
LCP1P13796 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LCP1P13796 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LCP1P13796 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
LCP1P13796 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
LCP1P13796 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
LCP1P13796 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LCP1P13796 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LCP1P13796 AP000244.1-201ENST00000424582 201 ntBASIC14.21□□□□□ -0.13
LCP1P13796 PSAT1P2-201ENST00000426107 972 ntBASIC14.21□□□□□ -0.13
LCP1P13796 AC022201.1-201ENST00000452525 577 ntTSL 4 BASIC14.21□□□□□ -0.13
LCP1P13796 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC14.21□□□□□ -0.13
LCP1P13796 TBC1D3P6-201ENST00000505954 962 ntBASIC14.21□□□□□ -0.13
LCP1P13796 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC14.21□□□□□ -0.13
LCP1P13796 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC14.21□□□□□ -0.13
LCP1P13796 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC14.21□□□□□ -0.13
LCP1P13796 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC14.21□□□□□ -0.13
LCP1P13796 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LCP1P13796 AC011247.3-201ENST00000603297 438 ntBASIC14.21□□□□□ -0.13
LCP1P13796 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LCP1P13796 AC011471.3-201ENST00000623576 402 ntBASIC14.21□□□□□ -0.13
LCP1P13796 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC14.21□□□□□ -0.13
LCP1P13796 PTPRVP-205ENST00000641549 5067 ntBASIC14.21□□□□□ -0.13
LCP1P13796 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
LCP1P13796 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LCP1P13796 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LCP1P13796 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LCP1P13796 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LCP1P13796 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
LCP1P13796 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LCP1P13796 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
LCP1P13796 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LCP1P13796 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LCP1P13796 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC14.21□□□□□ -0.14
LCP1P13796 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
LCP1P13796 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LCP1P13796 TCAF1P1-201ENST00000414990 2232 ntBASIC14.21□□□□□ -0.14
LCP1P13796 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC14.21□□□□□ -0.14
LCP1P13796 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LCP1P13796 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LCP1P13796 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LCP1P13796 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LCP1P13796 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LCP1P13796 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LCP1P13796 CICP8-201ENST00000455800 2813 ntBASIC14.2□□□□□ -0.14
LCP1P13796 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LCP1P13796 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LCP1P13796 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LCP1P13796 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LCP1P13796 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LCP1P13796 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms