Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 LMO1-204ENST00000534484 770 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 AL161670.2-201ENST00000557650 1227 ntBASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 AC091544.8-201ENST00000619490 361 ntBASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 NAP1L6-202ENST00000641404 1222 ntBASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 AL157791.1-201ENST00000553667 1699 ntBASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 KRT8P18-201ENST00000413425 1445 ntBASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.69□□□□□ -0.38
AMBRA1Q9C0C7 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 UGT1A5-201ENST00000373414 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 AL162391.1-201ENST00000419853 2102 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 KCTD21-AS1-207ENST00000600795 1549 ntBASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 SEC23B-201ENST00000262544 3176 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 CLTCL1-210ENST00000617926 1695 ntTSL 2 BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 DRAM1-201ENST00000258534 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 PLK4-209ENST00000513090 3123 ntTSL 2 BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 TRAPPC2L-211ENST00000565504 3102 ntTSL 2 BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 FAM177A1-201ENST00000280987 2927 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 PLOD2-209ENST00000494950 2908 ntTSL 2 BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 HPSE2-201ENST00000370546 1849 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 AC106827.1-201ENST00000366454 431 ntBASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 AC253536.4-201ENST00000440539 267 ntBASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 AL133467.4-201ENST00000602953 725 ntBASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 AC138627.1-207ENST00000641560 1006 ntBASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 FAM198B-207ENST00000592057 3425 ntTSL 2 BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 POM121L7P-201ENST00000329949 2404 ntBASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 FAM95C-205ENST00000637556 2421 ntAPPRIS P5 TSL 2 BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 LINC01624-203ENST00000607074 3265 ntTSL 2 BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 TRMT10B-203ENST00000377754 1881 ntTSL 2 BASIC12.68□□□□□ -0.38
AMBRA1Q9C0C7 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 FBXO5-201ENST00000229758 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 DDC-212ENST00000615193 1674 ntTSL 3 BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms