Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
APOA4P06727 AC012531.1-201ENST00000562848 2680 ntBASIC13.61□□□□□ -0.23
APOA4P06727 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
APOA4P06727 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
APOA4P06727 AC019109.1-201ENST00000401725 1874 ntBASIC13.61□□□□□ -0.23
APOA4P06727 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOA4P06727 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
APOA4P06727 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
APOA4P06727 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
APOA4P06727 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOA4P06727 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOA4P06727 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC13.6□□□□□ -0.23
APOA4P06727 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APOA4P06727 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APOA4P06727 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APOA4P06727 HNRNPLP1-201ENST00000421896 1501 ntBASIC13.6□□□□□ -0.23
APOA4P06727 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC13.6□□□□□ -0.23
APOA4P06727 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC13.6□□□□□ -0.23
APOA4P06727 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOA4P06727 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOA4P06727 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOA4P06727 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC13.6□□□□□ -0.23
APOA4P06727 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOA4P06727 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC13.6□□□□□ -0.23
APOA4P06727 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
APOA4P06727 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOA4P06727 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOA4P06727 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOA4P06727 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APOA4P06727 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC13.6□□□□□ -0.23
APOA4P06727 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOA4P06727 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
APOA4P06727 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOA4P06727 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
APOA4P06727 DKKL1P1-201ENST00000400550 698 ntBASIC13.6□□□□□ -0.23
APOA4P06727 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC13.6□□□□□ -0.23
APOA4P06727 ORAOV1P1-201ENST00000503108 395 ntBASIC13.6□□□□□ -0.23
APOA4P06727 AC019193.1-201ENST00000506678 823 ntBASIC13.6□□□□□ -0.23
APOA4P06727 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC13.6□□□□□ -0.23
APOA4P06727 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOA4P06727 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC13.6□□□□□ -0.23
APOA4P06727 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC13.6□□□□□ -0.23
APOA4P06727 SNORD3B-1-201ENST00000577988 758 ntBASIC13.6□□□□□ -0.23
APOA4P06727 MIR2392-201ENST00000584881 84 ntBASIC13.6□□□□□ -0.23
APOA4P06727 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APOA4P06727 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC13.6□□□□□ -0.23
APOA4P06727 AC012073.1-201ENST00000606114 1108 ntBASIC13.6□□□□□ -0.23
APOA4P06727 PPA1-206ENST00000625364 644 ntTSL 5 BASIC13.6□□□□□ -0.23
APOA4P06727 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APOA4P06727 PXK-210ENST00000479241 2817 ntTSL 2 BASIC13.6□□□□□ -0.23
APOA4P06727 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC13.6□□□□□ -0.23
APOA4P06727 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC13.6□□□□□ -0.23
APOA4P06727 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APOA4P06727 MAPK10-262ENST00000641051 5738 ntBASIC13.6□□□□□ -0.23
APOA4P06727 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOA4P06727 AOC4P-203ENST00000566825 2289 ntBASIC13.6□□□□□ -0.23
APOA4P06727 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
APOA4P06727 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
APOA4P06727 AL021155.1-201ENST00000438808 2637 ntBASIC13.6□□□□□ -0.23
APOA4P06727 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOA4P06727 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOA4P06727 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOA4P06727 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
APOA4P06727 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
APOA4P06727 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APOA4P06727 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APOA4P06727 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APOA4P06727 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOA4P06727 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOA4P06727 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC13.59□□□□□ -0.23
APOA4P06727 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOA4P06727 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APOA4P06727 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC13.59□□□□□ -0.23
APOA4P06727 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APOA4P06727 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APOA4P06727 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC13.59□□□□□ -0.23
APOA4P06727 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC13.59□□□□□ -0.23
APOA4P06727 NEU3-205ENST00000531619 582 ntTSL 5 BASIC13.59□□□□□ -0.23
APOA4P06727 HERC2P11-201ENST00000562845 725 ntBASIC13.59□□□□□ -0.23
APOA4P06727 MT3-203ENST00000565838 421 ntTSL 3 BASIC13.59□□□□□ -0.23
APOA4P06727 AC100756.2-201ENST00000569537 736 ntBASIC13.59□□□□□ -0.23
APOA4P06727 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC13.59□□□□□ -0.23
APOA4P06727 USP47-202ENST00000339865 7775 ntTSL 2 BASIC13.59□□□□□ -0.23
APOA4P06727 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC13.59□□□□□ -0.23
APOA4P06727 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APOA4P06727 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC13.59□□□□□ -0.23
APOA4P06727 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APOA4P06727 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOA4P06727 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APOA4P06727 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC13.59□□□□□ -0.23
APOA4P06727 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC13.59□□□□□ -0.23
APOA4P06727 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOA4P06727 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOA4P06727 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APOA4P06727 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APOA4P06727 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC13.59□□□□□ -0.23
APOA4P06727 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APOA4P06727 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOA4P06727 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOA4P06727 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms