Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 AF254983.2-201ENST00000612331 135 ntBASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 C2-209ENST00000452323 1999 ntTSL 2 BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 HLA-DQB1-202ENST00000399079 1501 ntBASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC10.27□□□□□ -0.76
HLA-DRB4X5D2U9 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
HLA-DRB4X5D2U9 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
HLA-DRB4X5D2U9 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
HLA-DRB4X5D2U9 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
HLA-DRB4X5D2U9 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
HLA-DRB4X5D2U9 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
HLA-DRB4X5D2U9 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
HLA-DRB4X5D2U9 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
HLA-DRB4X5D2U9 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
HLA-DRB4X5D2U9 AC115284.2-201ENST00000624646 2054 ntBASIC10.27□□□□□ -0.76
HLA-DRB4X5D2U9 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
HLA-DRB4X5D2U9 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
HLA-DRB4X5D2U9 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 CIC-204ENST00000572681 8218 ntTSL 5 BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 AC106827.1-201ENST00000366454 431 ntBASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 AL627231.1-201ENST00000394467 1125 ntBASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 SLC25A24P2-201ENST00000415059 510 ntBASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 AC092573.1-201ENST00000433054 884 ntBASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 EEF1DP2-201ENST00000433698 843 ntBASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 LINC01428-201ENST00000449581 874 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 AC018638.5-201ENST00000450885 754 ntBASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 GRPEL2P1-201ENST00000453145 339 ntBASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 IGHJ2P-201ENST00000454480 60 ntBASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 SCARNA12-201ENST00000459155 270 ntBASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 RN7SL720P-201ENST00000488178 304 ntBASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 RN7SL767P-201ENST00000493013 295 ntBASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 FGFR3P5-201ENST00000564496 886 ntBASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 RCC2P5-201ENST00000492126 1487 ntBASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms