Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC12.09□□□□□ -0.47
APOC1P02654 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC12.09□□□□□ -0.47
APOC1P02654 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC12.09□□□□□ -0.47
APOC1P02654 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
APOC1P02654 MIR6752-201ENST00000618442 71 ntBASIC12.09□□□□□ -0.47
APOC1P02654 GARS-210ENST00000627489 324 ntTSL 4 BASIC12.09□□□□□ -0.47
APOC1P02654 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC12.09□□□□□ -0.47
APOC1P02654 LINC01544-201ENST00000567801 5168 ntTSL 2 BASIC12.09□□□□□ -0.47
APOC1P02654 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
APOC1P02654 AL133338.1-201ENST00000565695 1517 ntBASIC12.09□□□□□ -0.47
APOC1P02654 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOC1P02654 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
APOC1P02654 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
APOC1P02654 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
APOC1P02654 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOC1P02654 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOC1P02654 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
APOC1P02654 GAB2-201ENST00000340149 6052 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
APOC1P02654 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOC1P02654 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOC1P02654 AC026271.4-201ENST00000578214 1833 ntBASIC12.09□□□□□ -0.47
APOC1P02654 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
APOC1P02654 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOC1P02654 TUBBP5-203ENST00000508529 1334 ntBASIC12.09□□□□□ -0.47
APOC1P02654 AL445209.1-201ENST00000607269 3491 ntBASIC12.09□□□□□ -0.47
APOC1P02654 SNHG14-212ENST00000549804 7844 ntTSL 5 BASIC12.09□□□□□ -0.47
APOC1P02654 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
APOC1P02654 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC12.08□□□□□ -0.47
APOC1P02654 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
APOC1P02654 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
APOC1P02654 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC12.08□□□□□ -0.48
APOC1P02654 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
APOC1P02654 SYDE1-203ENST00000600252 3832 ntTSL 2 BASIC12.08□□□□□ -0.48
APOC1P02654 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC12.08□□□□□ -0.48
APOC1P02654 ZNF142-205ENST00000449707 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOC1P02654 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC12.08□□□□□ -0.48
APOC1P02654 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC12.08□□□□□ -0.48
APOC1P02654 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOC1P02654 PLEKHG3-201ENST00000247226 10351 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOC1P02654 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOC1P02654 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC12.08□□□□□ -0.48
APOC1P02654 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOC1P02654 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC12.08□□□□□ -0.48
APOC1P02654 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOC1P02654 ST6GAL2-201ENST00000361686 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOC1P02654 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
APOC1P02654 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
APOC1P02654 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC12.08□□□□□ -0.48
APOC1P02654 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
APOC1P02654 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
APOC1P02654 SAT1-201ENST00000379251 801 ntTSL 2 BASIC12.08□□□□□ -0.48
APOC1P02654 SAT1-202ENST00000379253 909 ntTSL 2 BASIC12.08□□□□□ -0.48
APOC1P02654 SAT1-203ENST00000379254 868 ntTSL 3 BASIC12.08□□□□□ -0.48
APOC1P02654 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOC1P02654 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
APOC1P02654 AL627231.1-201ENST00000394467 1125 ntBASIC12.08□□□□□ -0.48
APOC1P02654 MIR1908-201ENST00000410394 80 ntBASIC12.08□□□□□ -0.48
APOC1P02654 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
APOC1P02654 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC12.08□□□□□ -0.48
APOC1P02654 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.08□□□□□ -0.48
APOC1P02654 AC016700.1-201ENST00000429424 312 ntBASIC12.08□□□□□ -0.48
APOC1P02654 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC12.08□□□□□ -0.48
APOC1P02654 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC12.08□□□□□ -0.48
APOC1P02654 ARTN-209ENST00000479128 471 ntTSL 3 BASIC12.08□□□□□ -0.48
APOC1P02654 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC12.08□□□□□ -0.48
APOC1P02654 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
APOC1P02654 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
APOC1P02654 AC008723.1-201ENST00000506922 207 ntBASIC12.08□□□□□ -0.48
APOC1P02654 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
APOC1P02654 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
APOC1P02654 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC12.08□□□□□ -0.48
APOC1P02654 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC12.08□□□□□ -0.48
APOC1P02654 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC12.08□□□□□ -0.48
APOC1P02654 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC12.08□□□□□ -0.48
APOC1P02654 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOC1P02654 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOC1P02654 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOC1P02654 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC12.08□□□□□ -0.48
APOC1P02654 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
APOC1P02654 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOC1P02654 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOC1P02654 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
APOC1P02654 AC138761.6-201ENST00000583997 1423 ntBASIC12.08□□□□□ -0.48
APOC1P02654 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOC1P02654 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
APOC1P02654 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
APOC1P02654 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOC1P02654 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOC1P02654 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC12.08□□□□□ -0.48
APOC1P02654 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
APOC1P02654 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC12.08□□□□□ -0.48
APOC1P02654 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
APOC1P02654 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
APOC1P02654 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
APOC1P02654 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
APOC1P02654 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC12.08□□□□□ -0.48
APOC1P02654 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC12.08□□□□□ -0.48
APOC1P02654 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOC1P02654 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOC1P02654 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms