Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 PLEKHA3-201ENST00000234453 13880 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
NACAE9PAV3 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
NACAE9PAV3 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC10.04□□□□□ -0.8
NACAE9PAV3 IGSF9-202ENST00000368094 4044 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
NACAE9PAV3 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
NACAE9PAV3 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
NACAE9PAV3 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC10.04□□□□□ -0.8
NACAE9PAV3 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
NACAE9PAV3 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
NACAE9PAV3 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
NACAE9PAV3 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
NACAE9PAV3 PCDHB7-201ENST00000231137 3765 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
NACAE9PAV3 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
NACAE9PAV3 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
NACAE9PAV3 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
NACAE9PAV3 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC10.04□□□□□ -0.8
NACAE9PAV3 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
NACAE9PAV3 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC10.04□□□□□ -0.8
NACAE9PAV3 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC10.04□□□□□ -0.8
NACAE9PAV3 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC10.04□□□□□ -0.8
NACAE9PAV3 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC10.04□□□□□ -0.8
NACAE9PAV3 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC10.04□□□□□ -0.8
NACAE9PAV3 CU633904.3-201ENST00000624042 1029 ntBASIC10.04□□□□□ -0.8
NACAE9PAV3 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
NACAE9PAV3 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
NACAE9PAV3 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
NACAE9PAV3 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
NACAE9PAV3 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
NACAE9PAV3 SHMT1P1-201ENST00000419974 1312 ntBASIC10.04□□□□□ -0.8
NACAE9PAV3 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
NACAE9PAV3 AL391294.1-201ENST00000641352 4068 ntBASIC10.04□□□□□ -0.8
NACAE9PAV3 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
NACAE9PAV3 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
NACAE9PAV3 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
NACAE9PAV3 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC10.04□□□□□ -0.8
NACAE9PAV3 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
NACAE9PAV3 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
NACAE9PAV3 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC10.04□□□□□ -0.8
NACAE9PAV3 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
NACAE9PAV3 KRT8P43-201ENST00000406052 1458 ntBASIC10.04□□□□□ -0.8
NACAE9PAV3 AC007952.5-201ENST00000572818 1486 ntBASIC10.04□□□□□ -0.8
NACAE9PAV3 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
NACAE9PAV3 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
NACAE9PAV3 FN1-204ENST00000356005 7846 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
NACAE9PAV3 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
NACAE9PAV3 SEC23B-201ENST00000262544 3176 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
NACAE9PAV3 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
NACAE9PAV3 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
NACAE9PAV3 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
NACAE9PAV3 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
NACAE9PAV3 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
NACAE9PAV3 AP000437.1-201ENST00000624057 2085 ntBASIC10.04□□□□□ -0.8
NACAE9PAV3 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
NACAE9PAV3 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
NACAE9PAV3 AP003969.2-201ENST00000623739 2275 ntBASIC10.03□□□□□ -0.8
NACAE9PAV3 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
NACAE9PAV3 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
NACAE9PAV3 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
NACAE9PAV3 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
NACAE9PAV3 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
NACAE9PAV3 CMC1-204ENST00000423894 549 ntTSL 2 BASIC10.03□□□□□ -0.8
NACAE9PAV3 TSPY25P-201ENST00000429463 745 ntBASIC10.03□□□□□ -0.8
NACAE9PAV3 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC10.03□□□□□ -0.8
NACAE9PAV3 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC10.03□□□□□ -0.8
NACAE9PAV3 RN7SL277P-201ENST00000481521 288 ntBASIC10.03□□□□□ -0.8
NACAE9PAV3 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC10.03□□□□□ -0.8
NACAE9PAV3 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC10.03□□□□□ -0.8
NACAE9PAV3 SNORD3B-2-202ENST00000571722 791 ntBASIC10.03□□□□□ -0.8
NACAE9PAV3 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC10.03□□□□□ -0.8
NACAE9PAV3 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC10.03□□□□□ -0.8
NACAE9PAV3 AC138894.2-201ENST00000602838 371 ntBASIC10.03□□□□□ -0.8
NACAE9PAV3 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC10.03□□□□□ -0.8
NACAE9PAV3 AL139424.3-202ENST00000641619 917 ntBASIC10.03□□□□□ -0.8
NACAE9PAV3 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
NACAE9PAV3 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC10.03□□□□□ -0.8
NACAE9PAV3 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
NACAE9PAV3 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
NACAE9PAV3 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
NACAE9PAV3 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC10.03□□□□□ -0.8
NACAE9PAV3 PER1-202ENST00000354903 3115 ntTSL 2 BASIC10.03□□□□□ -0.8
NACAE9PAV3 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
NACAE9PAV3 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC10.03□□□□□ -0.8
NACAE9PAV3 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC10.03□□□□□ -0.8
NACAE9PAV3 PAPLN-208ENST00000555445 4282 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
NACAE9PAV3 CAST-206ENST00000395812 4506 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
NACAE9PAV3 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC10.03□□□□□ -0.8
NACAE9PAV3 UGGT2-203ENST00000376747 4832 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
NACAE9PAV3 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
NACAE9PAV3 PAX9-202ENST00000402703 3104 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
NACAE9PAV3 AC073957.3-201ENST00000609998 6758 ntBASIC10.03□□□□□ -0.8
NACAE9PAV3 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
NACAE9PAV3 SLC6A7-201ENST00000230671 3739 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
NACAE9PAV3 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
NACAE9PAV3 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
NACAE9PAV3 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
NACAE9PAV3 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
NACAE9PAV3 SPTBN1-202ENST00000356805 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
NACAE9PAV3 DNASE1L1-205ENST00000369809 3008 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
NACAE9PAV3 TP73-207ENST00000378290 1831 ntTSL 2 BASIC10.03□□□□□ -0.8
NACAE9PAV3 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms