Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 IKBKE-203ENST00000581977 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLCN1P35523 PRKAG1-205ENST00000547306 1531 ntTSL 5 BASIC15.5■□□□□ 0.07
CLCN1P35523 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC15.5■□□□□ 0.07
CLCN1P35523 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.5■□□□□ 0.07
CLCN1P35523 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLCN1P35523 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.5■□□□□ 0.07
CLCN1P35523 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.5■□□□□ 0.07
CLCN1P35523 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.5■□□□□ 0.07
CLCN1P35523 AP005482.1-201ENST00000563722 1273 ntBASIC15.5■□□□□ 0.07
CLCN1P35523 AL390728.6-201ENST00000566446 1246 ntBASIC15.5■□□□□ 0.07
CLCN1P35523 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.5■□□□□ 0.07
CLCN1P35523 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CLCN1P35523 BBOF1-201ENST00000394009 3106 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
CLCN1P35523 SNX12-207ENST00000622277 2422 ntAPPRIS P3 TSL 4 BASIC15.5■□□□□ 0.07
CLCN1P35523 DGKH-203ENST00000379274 4202 ntTSL 2 BASIC15.5■□□□□ 0.07
CLCN1P35523 ZSCAN31-201ENST00000344279 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLCN1P35523 RCC2P1-201ENST00000452257 1476 ntBASIC15.5■□□□□ 0.07
CLCN1P35523 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLCN1P35523 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLCN1P35523 RTN3-203ENST00000341307 2524 ntTSL 2 BASIC15.5■□□□□ 0.07
CLCN1P35523 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CLCN1P35523 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC15.5■□□□□ 0.07
CLCN1P35523 SYDE1-203ENST00000600252 3832 ntTSL 2 BASIC15.5■□□□□ 0.07
CLCN1P35523 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLCN1P35523 FAM95B1-201ENST00000455995 4236 ntTSL 2 BASIC15.5■□□□□ 0.07
CLCN1P35523 ABR-201ENST00000291107 2673 ntTSL 2 BASIC15.5■□□□□ 0.07
CLCN1P35523 DSCR3-201ENST00000309117 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN1P35523 POLR3E-219ENST00000615879 3655 ntTSL 2 BASIC15.49■□□□□ 0.07
CLCN1P35523 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC15.49■□□□□ 0.07
CLCN1P35523 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CLCN1P35523 RPS6KA1-220ENST00000531382 2359 ntTSL 2 BASIC15.49■□□□□ 0.07
CLCN1P35523 RAP1A-202ENST00000369709 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN1P35523 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN1P35523 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CLCN1P35523 FBLN1-203ENST00000340923 2348 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN1P35523 UEVLD-213ENST00000543987 2503 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN1P35523 LIG1-221ENST00000613670 3949 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN1P35523 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN1P35523 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN1P35523 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN1P35523 USP3-204ENST00000540797 5474 ntTSL 2 BASIC15.49■□□□□ 0.07
CLCN1P35523 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN1P35523 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN1P35523 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN1P35523 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN1P35523 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN1P35523 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.49■□□□□ 0.07
CLCN1P35523 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CLCN1P35523 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN1P35523 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.49■□□□□ 0.07
CLCN1P35523 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.49■□□□□ 0.07
CLCN1P35523 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.49■□□□□ 0.07
CLCN1P35523 EEF1DP1-201ENST00000585891 896 ntBASIC15.49■□□□□ 0.07
CLCN1P35523 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN1P35523 DIDO1-205ENST00000370371 2833 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN1P35523 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN1P35523 POLA2-201ENST00000265465 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN1P35523 CDK5RAP3-202ENST00000536708 1975 ntTSL 2 BASIC15.49■□□□□ 0.07
CLCN1P35523 FLCN-201ENST00000285071 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN1P35523 RETREG3-201ENST00000309428 3759 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN1P35523 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.49■□□□□ 0.07
CLCN1P35523 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC15.48■□□□□ 0.07
CLCN1P35523 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN1P35523 TSNAXIP1-201ENST00000388833 2429 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN1P35523 DNAI2-201ENST00000311014 2236 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN1P35523 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN1P35523 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC15.48■□□□□ 0.07
CLCN1P35523 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN1P35523 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN1P35523 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CLCN1P35523 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN1P35523 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN1P35523 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN1P35523 SLC6A7-201ENST00000230671 3739 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN1P35523 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN1P35523 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN1P35523 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN1P35523 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN1P35523 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN1P35523 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN1P35523 MBP-207ENST00000397865 2127 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN1P35523 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.48■□□□□ 0.07
CLCN1P35523 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.48■□□□□ 0.07
CLCN1P35523 YBX1P6-201ENST00000442962 1002 ntBASIC15.48■□□□□ 0.07
CLCN1P35523 KRT223P-202ENST00000449164 1292 ntBASIC15.48■□□□□ 0.07
CLCN1P35523 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.48■□□□□ 0.07
CLCN1P35523 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.48■□□□□ 0.07
CLCN1P35523 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.48■□□□□ 0.07
CLCN1P35523 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.48■□□□□ 0.07
CLCN1P35523 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
CLCN1P35523 RBM8B-201ENST00000555532 525 ntBASIC15.48■□□□□ 0.07
CLCN1P35523 AL160314.3-201ENST00000556041 767 ntBASIC15.48■□□□□ 0.07
CLCN1P35523 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CLCN1P35523 IFT22-211ENST00000621899 2272 ntTSL 2 BASIC15.48■□□□□ 0.07
CLCN1P35523 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN1P35523 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
CLCN1P35523 ZNF839-209ENST00000559185 2905 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CLCN1P35523 NUAK2-201ENST00000367157 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN1P35523 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
CLCN1P35523 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms