Protein–RNA interactions for Protein: P30260

CDC27, Cell division cycle protein 27 homolog, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27P30260 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
CDC27P30260 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDC27P30260 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CDC27P30260 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDC27P30260 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDC27P30260 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.67■□□□□ 0.1
CDC27P30260 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDC27P30260 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDC27P30260 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDC27P30260 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CDC27P30260 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CDC27P30260 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC15.67■□□□□ 0.1
CDC27P30260 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDC27P30260 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDC27P30260 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CDC27P30260 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDC27P30260 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC27P30260 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC15.66■□□□□ 0.1
CDC27P30260 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC15.66■□□□□ 0.1
CDC27P30260 SRL-202ENST00000537996 1814 ntTSL 2 BASIC15.66■□□□□ 0.1
CDC27P30260 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC15.66■□□□□ 0.1
CDC27P30260 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC15.66■□□□□ 0.1
CDC27P30260 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC27P30260 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC27P30260 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC27P30260 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC15.66■□□□□ 0.1
CDC27P30260 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC27P30260 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC27P30260 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC27P30260 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC15.66■□□□□ 0.1
CDC27P30260 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC15.66■□□□□ 0.1
CDC27P30260 PSAT1P2-201ENST00000426107 972 ntBASIC15.66■□□□□ 0.1
CDC27P30260 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC15.66■□□□□ 0.1
CDC27P30260 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CDC27P30260 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC15.66■□□□□ 0.1
CDC27P30260 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC15.66■□□□□ 0.1
CDC27P30260 RN7SL134P-201ENST00000579756 303 ntBASIC15.66■□□□□ 0.1
CDC27P30260 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC15.66■□□□□ 0.1
CDC27P30260 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDC27P30260 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC15.66■□□□□ 0.1
CDC27P30260 Z98257.2-202ENST00000641138 1548 ntBASIC15.66■□□□□ 0.1
CDC27P30260 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CDC27P30260 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC15.66■□□□□ 0.1
CDC27P30260 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC27P30260 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC27P30260 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
CDC27P30260 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC27P30260 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CDC27P30260 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CDC27P30260 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC27P30260 HMGB1-202ENST00000339872 2319 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CDC27P30260 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDC27P30260 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC27P30260 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDC27P30260 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC15.66■□□□□ 0.1
CDC27P30260 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC27P30260 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDC27P30260 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC27P30260 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CDC27P30260 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC15.65■□□□□ 0.1
CDC27P30260 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC27P30260 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC15.65■□□□□ 0.1
CDC27P30260 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC15.65■□□□□ 0.1
CDC27P30260 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC27P30260 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC27P30260 ACOX2-201ENST00000302819 2426 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC27P30260 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDC27P30260 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC15.65■□□□□ 0.1
CDC27P30260 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC27P30260 AC139491.6-202ENST00000637171 2077 ntBASIC15.65■□□□□ 0.1
CDC27P30260 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC27P30260 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CDC27P30260 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC27P30260 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CDC27P30260 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDC27P30260 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDC27P30260 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC15.65■□□□□ 0.1
CDC27P30260 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC15.65■□□□□ 0.1
CDC27P30260 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC15.65■□□□□ 0.1
CDC27P30260 RN7SL8P-201ENST00000461771 266 ntBASIC15.65■□□□□ 0.1
CDC27P30260 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
CDC27P30260 RN7SL351P-201ENST00000469306 248 ntBASIC15.65■□□□□ 0.1
CDC27P30260 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDC27P30260 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC15.65■□□□□ 0.1
CDC27P30260 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC15.65■□□□□ 0.1
CDC27P30260 COG4-212ENST00000564653 590 ntTSL 5 BASIC15.65■□□□□ 0.1
CDC27P30260 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC27P30260 AP001120.3-201ENST00000585729 489 ntBASIC15.65■□□□□ 0.1
CDC27P30260 C19orf53-202ENST00000588234 873 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC27P30260 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CDC27P30260 CSTP2-201ENST00000610599 398 ntBASIC15.65■□□□□ 0.1
CDC27P30260 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC15.65■□□□□ 0.1
CDC27P30260 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC15.65■□□□□ 0.1
CDC27P30260 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC27P30260 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC27P30260 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC27P30260 KRT18P40-201ENST00000599859 1571 ntBASIC15.65■□□□□ 0.1
CDC27P30260 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC27P30260 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDC27P30260 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms