Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TPM3P06753 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TPM3P06753 KRT42P-201ENST00000398469 2864 ntTSL 2 BASIC15.28■□□□□ 0.04
TPM3P06753 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TPM3P06753 DACH2-201ENST00000373125 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TPM3P06753 AC099786.2-201ENST00000427892 2203 ntTSL 2 BASIC15.28■□□□□ 0.04
TPM3P06753 LINC01106-201ENST00000436665 2244 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TPM3P06753 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
TPM3P06753 USP36-202ENST00000449938 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TPM3P06753 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TPM3P06753 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TPM3P06753 TXNRD1-202ENST00000388854 4277 ntTSL 5 BASIC15.28■□□□□ 0.04
TPM3P06753 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
TPM3P06753 PYGO2-202ENST00000368457 3146 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TPM3P06753 NBN-201ENST00000265433 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TPM3P06753 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TPM3P06753 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC15.27■□□□□ 0.04
TPM3P06753 GOLGA6L7P-201ENST00000567390 2397 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TPM3P06753 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC15.27■□□□□ 0.04
TPM3P06753 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC15.27■□□□□ 0.04
TPM3P06753 CICP2-201ENST00000420675 2328 ntBASIC15.27■□□□□ 0.04
TPM3P06753 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TPM3P06753 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TPM3P06753 SLC45A2-202ENST00000382102 2723 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TPM3P06753 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC15.27■□□□□ 0.04
TPM3P06753 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TPM3P06753 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TPM3P06753 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TPM3P06753 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TPM3P06753 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TPM3P06753 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TPM3P06753 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.27■□□□□ 0.04
TPM3P06753 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TPM3P06753 TMEM14DP-201ENST00000422205 345 ntBASIC15.27■□□□□ 0.04
TPM3P06753 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC15.27■□□□□ 0.04
TPM3P06753 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.27■□□□□ 0.04
TPM3P06753 RPL7P3-201ENST00000441388 714 ntBASIC15.27■□□□□ 0.04
TPM3P06753 AC007279.1-201ENST00000448547 837 ntBASIC15.27■□□□□ 0.04
TPM3P06753 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC15.27■□□□□ 0.04
TPM3P06753 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
TPM3P06753 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.27■□□□□ 0.04
TPM3P06753 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC15.27■□□□□ 0.04
TPM3P06753 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TPM3P06753 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC15.27■□□□□ 0.04
TPM3P06753 TP53-221ENST00000615910 1149 ntTSL 5 BASIC15.27■□□□□ 0.04
TPM3P06753 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TPM3P06753 CTNS-201ENST00000046640 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TPM3P06753 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TPM3P06753 DLGAP2-214ENST00000612087 10088 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
TPM3P06753 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TPM3P06753 AC090136.3-201ENST00000520834 2704 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TPM3P06753 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TPM3P06753 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC15.27■□□□□ 0.03
TPM3P06753 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TPM3P06753 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC15.27■□□□□ 0.03
TPM3P06753 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TPM3P06753 C1QTNF9B-202ENST00000382140 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TPM3P06753 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TPM3P06753 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC15.26■□□□□ 0.03
TPM3P06753 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TPM3P06753 RBM39-243ENST00000528062 2421 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TPM3P06753 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TPM3P06753 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC15.26■□□□□ 0.03
TPM3P06753 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TPM3P06753 ZNF773-205ENST00000599847 5832 ntTSL 2 BASIC15.26■□□□□ 0.03
TPM3P06753 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TPM3P06753 FBXO5-201ENST00000229758 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TPM3P06753 ZKSCAN1-202ENST00000426572 2011 ntTSL 2 BASIC15.26■□□□□ 0.03
TPM3P06753 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC15.26■□□□□ 0.03
TPM3P06753 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TPM3P06753 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.26■□□□□ 0.03
TPM3P06753 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.26■□□□□ 0.03
TPM3P06753 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TPM3P06753 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TPM3P06753 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TPM3P06753 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.26■□□□□ 0.03
TPM3P06753 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TPM3P06753 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.26■□□□□ 0.03
TPM3P06753 SCARNA21-201ENST00000517026 139 ntBASIC15.26■□□□□ 0.03
TPM3P06753 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
TPM3P06753 MIR3940-201ENST00000579148 102 ntBASIC15.26■□□□□ 0.03
TPM3P06753 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
TPM3P06753 AC008687.7-202ENST00000637404 953 ntBASIC15.26■□□□□ 0.03
TPM3P06753 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TPM3P06753 PLA2G4E-AS1-201ENST00000499478 2499 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TPM3P06753 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC15.26■□□□□ 0.03
TPM3P06753 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
TPM3P06753 EVA1A-201ENST00000233712 1815 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
TPM3P06753 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TPM3P06753 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TPM3P06753 ZNF646-201ENST00000300850 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TPM3P06753 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TPM3P06753 BAIAP2-AS1-202ENST00000577066 4465 ntTSL 2 BASIC15.25■□□□□ 0.03
TPM3P06753 ERP44-201ENST00000262455 4854 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TPM3P06753 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC15.25■□□□□ 0.03
TPM3P06753 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TPM3P06753 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TPM3P06753 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC15.25■□□□□ 0.03
TPM3P06753 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TPM3P06753 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 532.1 ms