Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 ETV2-207ENST00000619399 994 ntTSL 5 BASIC14.95□□□□□ -0.02
GPC3P51654 AC139713.2-207ENST00000641556 1292 ntBASIC14.95□□□□□ -0.02
GPC3P51654 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GPC3P51654 AC126335.2-201ENST00000623362 4637 ntBASIC14.95□□□□□ -0.02
GPC3P51654 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
GPC3P51654 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GPC3P51654 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GPC3P51654 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
GPC3P51654 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GPC3P51654 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
GPC3P51654 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
GPC3P51654 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GPC3P51654 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
GPC3P51654 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
GPC3P51654 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
GPC3P51654 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GPC3P51654 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GPC3P51654 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC14.94□□□□□ -0.02
GPC3P51654 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
GPC3P51654 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GPC3P51654 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC14.94□□□□□ -0.02
GPC3P51654 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GPC3P51654 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GPC3P51654 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GPC3P51654 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
GPC3P51654 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.94□□□□□ -0.02
GPC3P51654 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
GPC3P51654 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GPC3P51654 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GPC3P51654 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GPC3P51654 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.94□□□□□ -0.02
GPC3P51654 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GPC3P51654 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GPC3P51654 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
GPC3P51654 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
GPC3P51654 SIRPB3P-201ENST00000340424 1216 ntBASIC14.94□□□□□ -0.02
GPC3P51654 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GPC3P51654 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
GPC3P51654 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC14.94□□□□□ -0.02
GPC3P51654 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
GPC3P51654 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC14.94□□□□□ -0.02
GPC3P51654 HLA-DMA-202ENST00000395303 1007 ntBASIC14.94□□□□□ -0.02
GPC3P51654 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC14.94□□□□□ -0.02
GPC3P51654 NRADDP-201ENST00000437305 691 ntBASIC14.94□□□□□ -0.02
GPC3P51654 AL451000.1-201ENST00000451300 1186 ntBASIC14.94□□□□□ -0.02
GPC3P51654 CISD2-202ENST00000503643 808 ntTSL 2 BASIC14.94□□□□□ -0.02
GPC3P51654 GDNF-207ENST00000515058 764 ntTSL 5 BASIC14.94□□□□□ -0.02
GPC3P51654 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
GPC3P51654 METTL7AP1-201ENST00000547343 496 ntBASIC14.94□□□□□ -0.02
GPC3P51654 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC14.94□□□□□ -0.02
GPC3P51654 SRP14-204ENST00000558720 780 ntTSL 2 BASIC14.94□□□□□ -0.02
GPC3P51654 NAA38-204ENST00000575208 529 ntTSL 3 BASIC14.94□□□□□ -0.02
GPC3P51654 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
GPC3P51654 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
GPC3P51654 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GPC3P51654 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC14.94□□□□□ -0.02
GPC3P51654 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GPC3P51654 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GPC3P51654 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
GPC3P51654 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC14.94□□□□□ -0.02
GPC3P51654 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GPC3P51654 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
GPC3P51654 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
GPC3P51654 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
GPC3P51654 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GPC3P51654 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GPC3P51654 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.93□□□□□ -0.02
GPC3P51654 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
GPC3P51654 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.93□□□□□ -0.02
GPC3P51654 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GPC3P51654 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.93□□□□□ -0.02
GPC3P51654 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GPC3P51654 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GPC3P51654 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
GPC3P51654 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
GPC3P51654 SNORD23-201ENST00000408876 110 ntBASIC14.93□□□□□ -0.02
GPC3P51654 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC14.93□□□□□ -0.02
GPC3P51654 IDS-203ENST00000428056 1213 ntTSL 2 BASIC14.93□□□□□ -0.02
GPC3P51654 ZNF877P-201ENST00000437614 612 ntBASIC14.93□□□□□ -0.02
GPC3P51654 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC14.93□□□□□ -0.02
GPC3P51654 CASP3-205ENST00000517513 964 ntTSL 5 BASIC14.93□□□□□ -0.02
GPC3P51654 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GPC3P51654 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC14.93□□□□□ -0.02
GPC3P51654 RN7SL596P-201ENST00000582123 288 ntBASIC14.93□□□□□ -0.02
GPC3P51654 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC14.93□□□□□ -0.02
GPC3P51654 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC14.93□□□□□ -0.02
GPC3P51654 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GPC3P51654 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC14.93□□□□□ -0.02
GPC3P51654 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
GPC3P51654 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
GPC3P51654 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
GPC3P51654 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GPC3P51654 MKRN5P-201ENST00000445263 1467 ntBASIC14.93□□□□□ -0.02
GPC3P51654 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
GPC3P51654 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.93□□□□□ -0.02
GPC3P51654 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GPC3P51654 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GPC3P51654 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
GPC3P51654 AC114271.1-201ENST00000612689 2813 ntBASIC14.93□□□□□ -0.02
GPC3P51654 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms