Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 LINC00303-201ENST00000367207 1891 ntTSL 2 BASIC15.52■□□□□ 0.08
CLCN1P35523 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCN1P35523 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCN1P35523 PLSCR1-201ENST00000342435 2233 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCN1P35523 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC15.52■□□□□ 0.08
CLCN1P35523 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.52■□□□□ 0.08
CLCN1P35523 DHX30-207ENST00000457607 3748 ntTSL 5 BASIC15.52■□□□□ 0.08
CLCN1P35523 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC15.52■□□□□ 0.08
CLCN1P35523 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLCN1P35523 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.52■□□□□ 0.08
CLCN1P35523 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCN1P35523 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCN1P35523 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLCN1P35523 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CLCN1P35523 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.52■□□□□ 0.08
CLCN1P35523 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CLCN1P35523 ST13P19-201ENST00000442505 1124 ntBASIC15.52■□□□□ 0.08
CLCN1P35523 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.52■□□□□ 0.08
CLCN1P35523 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.52■□□□□ 0.08
CLCN1P35523 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.52■□□□□ 0.08
CLCN1P35523 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.52■□□□□ 0.08
CLCN1P35523 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CLCN1P35523 AL162426.1-201ENST00000624141 743 ntBASIC15.52■□□□□ 0.08
CLCN1P35523 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.52■□□□□ 0.08
CLCN1P35523 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLCN1P35523 AC012676.5-201ENST00000624337 1955 ntBASIC15.52■□□□□ 0.07
CLCN1P35523 DPY19L2P3-201ENST00000414296 2326 ntBASIC15.52■□□□□ 0.07
CLCN1P35523 AGAP6-203ENST00000618025 2690 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
CLCN1P35523 LIG1-201ENST00000263274 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLCN1P35523 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLCN1P35523 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CLCN1P35523 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CLCN1P35523 ABCF2-201ENST00000222388 2185 ntTSL 5 BASIC15.52■□□□□ 0.07
CLCN1P35523 MB21D1-201ENST00000370315 3182 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLCN1P35523 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLCN1P35523 RABGAP1L-207ENST00000367690 1815 ntTSL 2 BASIC15.52■□□□□ 0.07
CLCN1P35523 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CLCN1P35523 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC15.52■□□□□ 0.07
CLCN1P35523 TUBB8-204ENST00000564130 2438 ntTSL 5 BASIC15.52■□□□□ 0.07
CLCN1P35523 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC15.52■□□□□ 0.07
CLCN1P35523 SPATA2-201ENST00000289431 4022 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLCN1P35523 RAB6A-201ENST00000310653 3389 ntAPPRIS P5 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLCN1P35523 MPP4-204ENST00000409143 2082 ntTSL 2 BASIC15.52■□□□□ 0.07
CLCN1P35523 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN1P35523 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN1P35523 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
CLCN1P35523 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN1P35523 PTGR2-205ENST00000555661 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN1P35523 AC020763.3-201ENST00000625095 2904 ntBASIC15.51■□□□□ 0.07
CLCN1P35523 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN1P35523 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN1P35523 PMS2-201ENST00000265849 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN1P35523 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN1P35523 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CLCN1P35523 STX3-207ENST00000633708 3111 ntTSL 5 BASIC15.51■□□□□ 0.07
CLCN1P35523 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC15.51■□□□□ 0.07
CLCN1P35523 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN1P35523 CCNA1-201ENST00000255465 1879 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN1P35523 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.51■□□□□ 0.07
CLCN1P35523 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN1P35523 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CLCN1P35523 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.51■□□□□ 0.07
CLCN1P35523 AC079178.1-201ENST00000420915 656 ntBASIC15.51■□□□□ 0.07
CLCN1P35523 AL354877.1-201ENST00000424412 413 ntBASIC15.51■□□□□ 0.07
CLCN1P35523 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.51■□□□□ 0.07
CLCN1P35523 GPR53P-205ENST00000457298 1084 ntBASIC15.51■□□□□ 0.07
CLCN1P35523 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN1P35523 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.51■□□□□ 0.07
CLCN1P35523 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.51■□□□□ 0.07
CLCN1P35523 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CLCN1P35523 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.51■□□□□ 0.07
CLCN1P35523 AC026790.2-201ENST00000606282 430 ntBASIC15.51■□□□□ 0.07
CLCN1P35523 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN1P35523 COX11-210ENST00000639671 696 ntBASIC15.51■□□□□ 0.07
CLCN1P35523 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN1P35523 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN1P35523 MMP19-206ENST00000548629 1813 ntTSL 5 BASIC15.51■□□□□ 0.07
CLCN1P35523 TP53I11-220ENST00000533940 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN1P35523 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN1P35523 TRIM31-210ENST00000376734 2043 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CLCN1P35523 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN1P35523 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN1P35523 PICART1-201ENST00000499842 2533 ntTSL 2 BASIC15.51■□□□□ 0.07
CLCN1P35523 MARK2P16-201ENST00000605714 1723 ntBASIC15.51■□□□□ 0.07
CLCN1P35523 DPAGT1-201ENST00000354202 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN1P35523 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC15.51■□□□□ 0.07
CLCN1P35523 CHCHD7-201ENST00000303759 1684 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN1P35523 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
CLCN1P35523 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN1P35523 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN1P35523 FCHO1-208ENST00000595033 2907 ntTSL 2 BASIC15.5■□□□□ 0.07
CLCN1P35523 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLCN1P35523 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLCN1P35523 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLCN1P35523 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.5■□□□□ 0.07
CLCN1P35523 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
CLCN1P35523 NTNG1-207ENST00000370073 3347 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CLCN1P35523 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLCN1P35523 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLCN1P35523 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms