Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC1P02654 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC12.13□□□□□ -0.47
APOC1P02654 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC12.13□□□□□ -0.47
APOC1P02654 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
APOC1P02654 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC12.13□□□□□ -0.47
APOC1P02654 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC12.13□□□□□ -0.47
APOC1P02654 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.13□□□□□ -0.47
APOC1P02654 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC12.13□□□□□ -0.47
APOC1P02654 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
APOC1P02654 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC1P02654 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
APOC1P02654 FAM90A11P-201ENST00000518378 2218 ntBASIC12.13□□□□□ -0.47
APOC1P02654 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
APOC1P02654 AC015819.3-201ENST00000624305 2674 ntBASIC12.13□□□□□ -0.47
APOC1P02654 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC1P02654 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
APOC1P02654 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC1P02654 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
APOC1P02654 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
APOC1P02654 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
APOC1P02654 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC1P02654 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
APOC1P02654 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
APOC1P02654 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC12.13□□□□□ -0.47
APOC1P02654 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
APOC1P02654 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC12.13□□□□□ -0.47
APOC1P02654 AC073869.2-201ENST00000417338 1026 ntBASIC12.13□□□□□ -0.47
APOC1P02654 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
APOC1P02654 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC12.13□□□□□ -0.47
APOC1P02654 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC12.13□□□□□ -0.47
APOC1P02654 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
APOC1P02654 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC12.13□□□□□ -0.47
APOC1P02654 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
APOC1P02654 PFN2-206ENST00000461930 606 ntTSL 4 BASIC12.13□□□□□ -0.47
APOC1P02654 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC12.13□□□□□ -0.47
APOC1P02654 AP001258.2-201ENST00000529891 490 ntBASIC12.13□□□□□ -0.47
APOC1P02654 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC12.13□□□□□ -0.47
APOC1P02654 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
APOC1P02654 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
APOC1P02654 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
APOC1P02654 AC020914.3-201ENST00000594712 304 ntBASIC12.13□□□□□ -0.47
APOC1P02654 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC12.13□□□□□ -0.47
APOC1P02654 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC12.13□□□□□ -0.47
APOC1P02654 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC12.13□□□□□ -0.47
APOC1P02654 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC1P02654 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC1P02654 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC12.13□□□□□ -0.47
APOC1P02654 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC1P02654 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC1P02654 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
APOC1P02654 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC12.13□□□□□ -0.47
APOC1P02654 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC12.13□□□□□ -0.47
APOC1P02654 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.13□□□□□ -0.47
APOC1P02654 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC1P02654 TBC1D27-202ENST00000424239 1573 ntBASIC12.13□□□□□ -0.47
APOC1P02654 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.13□□□□□ -0.47
APOC1P02654 AC067931.2-201ENST00000623655 2003 ntBASIC12.13□□□□□ -0.47
APOC1P02654 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC1P02654 KRT18P9-201ENST00000604826 1300 ntBASIC12.12□□□□□ -0.47
APOC1P02654 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC12.12□□□□□ -0.47
APOC1P02654 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC1P02654 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC1P02654 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC1P02654 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC1P02654 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
APOC1P02654 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
APOC1P02654 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.12□□□□□ -0.47
APOC1P02654 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
APOC1P02654 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC12.12□□□□□ -0.47
APOC1P02654 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC1P02654 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
APOC1P02654 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC1P02654 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC12.12□□□□□ -0.47
APOC1P02654 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.12□□□□□ -0.47
APOC1P02654 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC1P02654 KDM6A-214ENST00000621147 2876 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
APOC1P02654 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC1P02654 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC1P02654 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC1P02654 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
APOC1P02654 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
APOC1P02654 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC1P02654 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
APOC1P02654 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
APOC1P02654 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC1P02654 BANF1P3-201ENST00000412556 261 ntBASIC12.12□□□□□ -0.47
APOC1P02654 UBTFL8-201ENST00000426903 2112 ntBASIC12.12□□□□□ -0.47
APOC1P02654 AC006033.1-201ENST00000440505 426 ntBASIC12.12□□□□□ -0.47
APOC1P02654 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
APOC1P02654 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
APOC1P02654 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC12.12□□□□□ -0.47
APOC1P02654 AC114947.1-202ENST00000514136 344 ntBASIC12.12□□□□□ -0.47
APOC1P02654 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC12.12□□□□□ -0.47
APOC1P02654 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC12.12□□□□□ -0.47
APOC1P02654 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC1P02654 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC12.12□□□□□ -0.47
APOC1P02654 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC12.12□□□□□ -0.47
APOC1P02654 RN7SL219P-201ENST00000582872 296 ntBASIC12.12□□□□□ -0.47
APOC1P02654 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC12.12□□□□□ -0.47
APOC1P02654 AL118558.3-201ENST00000607414 1079 ntBASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms